BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10g12f
(446 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954257-1|CAJ14152.1| 324|Anopheles gambiae putative dodecenoy... 29 0.075
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 25 1.6
AY146744-1|AAO12104.1| 176|Anopheles gambiae odorant-binding pr... 24 2.1
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein. 23 6.5
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 22 8.6
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 22 8.6
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 22 8.6
>CR954257-1|CAJ14152.1| 324|Anopheles gambiae putative
dodecenoylCoA deltaisomerase protein.
Length = 324
Score = 29.1 bits (62), Expect = 0.075
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 115 QQMFTVDFHGEGITSCNKNQTRKIIICVITG 207
QQ ++ H EG+ + RK ++C ITG
Sbjct: 118 QQALSIVHHPEGVMGPTRRMIRKPLVCAITG 148
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 24.6 bits (51), Expect = 1.6
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 70 RIPQAGTNFSNEIRTQQMFTVDFHGEG 150
R AGT F + +++ F HGEG
Sbjct: 286 RFQHAGTRFKTKQFSKENFLATLHGEG 312
>AY146744-1|AAO12104.1| 176|Anopheles gambiae odorant-binding
protein AgamOBP8 protein.
Length = 176
Score = 24.2 bits (50), Expect = 2.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 302 YPILRTETHYCFMAEIGGVVVPTRADS 222
YP+LR T + G VV T AD+
Sbjct: 35 YPVLRNSTPFSIFQTHGAYVVRTFADA 61
>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
Length = 1009
Score = 22.6 bits (46), Expect = 6.5
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -1
Query: 278 HYCFMAEIGGVVVPTRADSQEVLP 207
H F AEIG +V DS E+LP
Sbjct: 939 HIEFHAEIGMSLVLKVGDSSEMLP 962
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 22.2 bits (45), Expect = 8.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 132 NREHLLSTYFIRKIGTRLRDSN 67
N EH +T+F+RKI SN
Sbjct: 326 NGEHKTNTHFMRKIPPGAEASN 347
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 22.2 bits (45), Expect = 8.6
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 88 TNFSNEIRTQQMFTVDFHGEGITSCNKNQTRKIIICVITGGRTSWESA 231
T+FS+ T + D +G+G TS + I + G ++ SA
Sbjct: 618 TSFSSSGNTTVVSDYDVYGKGSTSTTTSSAGTICTVLAEGDKSVSASA 665
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 22.2 bits (45), Expect = 8.6
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 88 TNFSNEIRTQQMFTVDFHGEGITSCNKNQTRKIIICVITGGRTSWESA 231
T+FS+ T + D +G+G TS + I + G ++ SA
Sbjct: 619 TSFSSSGNTTVVSDYDVYGKGSTSTTTSSAGTICTVLAEGDKSVSASA 666
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,599
Number of Sequences: 2352
Number of extensions: 10028
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37843779
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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