Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g12f
         (446 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF247761-1|AAF74192.1| 1671|Drosophila melanogaster kinesin supe...    29   3.8  
AE013599-2336|AAM70884.1| 1670|Drosophila melanogaster CG8566-PD...    29   3.8  
AE013599-1510|AAM68695.1|  555|Drosophila melanogaster CG8819-PC...    28   5.0  
AE013599-1507|AAO41402.1|  524|Drosophila melanogaster CG8821-PB...    28   5.0  
AE013599-2105|AAM70962.2|  266|Drosophila melanogaster CG30083-P...    27   8.7  

>AF247761-1|AAF74192.1| 1671|Drosophila melanogaster kinesin
            superfamily member DUnc104 protein.
          Length = 1671

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 281  FRFEG-WGSRCHYTETLELISQGGWRIYV 364
            +RFE  W S  H +  L  +SQGG  IY+
Sbjct: 1221 YRFEAAWDSSLHNSALLNRVSQGGETIYI 1249


>AE013599-2336|AAM70884.1| 1670|Drosophila melanogaster CG8566-PD
            protein.
          Length = 1670

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 281  FRFEG-WGSRCHYTETLELISQGGWRIYV 364
            +RFE  W S  H +  L  +SQGG  IY+
Sbjct: 1220 YRFEAAWDSSLHNSALLNRVSQGGETIYI 1248


>AE013599-1510|AAM68695.1|  555|Drosophila melanogaster CG8819-PC,
           isoform C protein.
          Length = 555

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 290 RTETHYCFMAEIGGVVVPTRADSQE 216
           + ET YC+    GG+VV  R++ +E
Sbjct: 363 KQETMYCYKDSYGGIVVSPRSEGEE 387


>AE013599-1507|AAO41402.1|  524|Drosophila melanogaster CG8821-PB,
           isoform B protein.
          Length = 524

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 290 RTETHYCFMAEIGGVVVPTRADSQE 216
           + ET YC+    GG+VV  R++ +E
Sbjct: 332 KQETMYCYKDSYGGIVVSPRSEGEE 356


>AE013599-2105|AAM70962.2|  266|Drosophila melanogaster CG30083-PA
           protein.
          Length = 266

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -2

Query: 397 VKWLLEPIDIYNVNAPPTLRYK 332
           + W+L  +D Y V +PP ++Y+
Sbjct: 239 IDWILMVVDNYTVRSPPKIQYR 260


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,307,488
Number of Sequences: 53049
Number of extensions: 466517
Number of successful extensions: 1010
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1435027293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)