Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10g11f
(607 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g66060.1 68418.m08323 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 1.8
At5g16220.1 68418.m01895 octicosapeptide/Phox/Bem1p (PB1) domain... 29 1.8
At4g26570.2 68417.m03831 calcineurin B-like protein 3 (CBL3) ide... 29 1.8
At1g20270.1 68414.m02531 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 2.4
At3g13060.2 68416.m01628 expressed protein contains Pfam profile... 29 3.2
At3g13060.1 68416.m01627 expressed protein contains Pfam profile... 29 3.2
At2g33410.1 68415.m04095 heterogeneous nuclear ribonucleoprotein... 29 3.2
At3g57170.1 68416.m06365 N-acetylglucosaminyl transferase compon... 28 4.2
At4g26830.1 68417.m03863 glycosyl hydrolase family 17 protein si... 28 5.5
At5g28120.1 68418.m03396 hypothetical protein 27 7.3
At5g28110.1 68418.m03395 hypothetical protein 27 7.3
At5g18510.1 68418.m02185 hypothetical protein 27 7.3
At4g37130.1 68417.m05258 hydroxyproline-rich glycoprotein family... 27 9.6
At4g26930.1 68417.m03875 myb family transcription factor (MYB97)... 27 9.6
At4g17615.1 68417.m02634 calcineurin B-like protein 1 (CBL1) ide... 27 9.6
At3g60370.1 68416.m06752 immunophilin / FKBP-type peptidyl-proly... 27 9.6
At3g54100.1 68416.m05981 expressed protein similar to axi 1 [Nic... 27 9.6
At2g28700.1 68415.m03488 MADS-box protein-related contains INTER... 27 9.6
>At5g66060.1 68418.m08323 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to prolyl 4-hydroxylase, alpha
subunit, from Rattus norvegicus [GI:474940], Mus
musculus [SP|Q60715], Homo sapiens [GI:18073925];
contains PF03171 2OG-Fe(II) oxygenase superfamily domain
Length = 267
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 310 HRRLQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQRTRSSAPLKR 453
H L + C YLI A+P +T ++KT T S RT S L R
Sbjct: 91 HNFLTKEECKYLIELAKPHMEKSTVVDEKTGKSTDSRVRTSSGTFLAR 138
>At5g16220.1 68418.m01895 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein hypothetical proteins -
Arabidopsis thaliana contains Pfam profile PF00564: PB1
domain
Length = 476
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 273 GMAAFMYR-QPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPE-NPIF 437
G FM + Q + Q TGQ YI TL T+Y N VYY + P+ PI+
Sbjct: 317 GYPPFMNQAQQQHIQVIYTGQPYITGNSPMTLPATAY--HHTNHVYYQRPPQPYPIY 371
>At4g26570.2 68417.m03831 calcineurin B-like protein 3 (CBL3)
identical to calcineurin B-like protein 3 (GI:22136404)
[Arabidopsis thaliana]
Length = 230
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = -3
Query: 605 ISDSLLRLGLLNFEYFRLW*FRSGRRFGSLGNRYQSGGVQFDLF 474
IS +++ GL+N E F+L F++ ++ +RYQS FDLF
Sbjct: 57 ISSAVIDDGLINKEEFQLALFKTNKKESLFADRYQS--QVFDLF 98
>At1g20270.1 68414.m02531 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to prolyl 4-hydroxylase, alpha
subunit, from Gallus gallus [GI:212530], Rattus
norvegicus [GI:474940], Mus musculus [SP|Q60715];
contains PF03171 2OG-Fe(II) oxygenase superfamily domain
Length = 287
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 310 HRRLQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQRTRSSAPLKR 453
H L + C YLI A+P + +T + +T S RT S L+R
Sbjct: 89 HNFLSKEECEYLISLAKPHMVKSTVVDSETGKSKDSRVRTSSGTFLRR 136
>At3g13060.2 68416.m01628 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 634
Score = 28.7 bits (61), Expect = 3.2
Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Frame = +3
Query: 165 YGNVDSLSYGS--GDSNRGGLVMSRYYNPYYNPRAVGGGMAAFMYRQPEAAQAPSTGQVY 338
Y NV+ L S G + LV Y YNP+ G + P A+ PS GQ+Y
Sbjct: 100 YVNVEGLDITSPVGFNENASLVYQTGYG--YNPQMPYGPYS------PAASPLPSEGQLY 151
Query: 339 IPDRRRQTLADTSY---VPQQENEVYYPQQPE 425
P + + A Y VP + P QPE
Sbjct: 152 SPQQFPFSGASPYYQQVVPPSMQYITSPTQPE 183
>At3g13060.1 68416.m01627 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 551
Score = 28.7 bits (61), Expect = 3.2
Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Frame = +3
Query: 165 YGNVDSLSYGS--GDSNRGGLVMSRYYNPYYNPRAVGGGMAAFMYRQPEAAQAPSTGQVY 338
Y NV+ L S G + LV Y YNP+ G + P A+ PS GQ+Y
Sbjct: 100 YVNVEGLDITSPVGFNENASLVYQTGYG--YNPQMPYGPYS------PAASPLPSEGQLY 151
Query: 339 IPDRRRQTLADTSY---VPQQENEVYYPQQPE 425
P + + A Y VP + P QPE
Sbjct: 152 SPQQFPFSGASPYYQQVVPPSMQYITSPTQPE 183
>At2g33410.1 68415.m04095 heterogeneous nuclear ribonucleoprotein,
putative / hnRNP, putative
Length = 404
Score = 28.7 bits (61), Expect = 3.2
Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Frame = +3
Query: 153 YNPYYGNVDSLSYGSGDSNRGGLVMSRYYN----PYYNPRAVGGGMAAFMYRQPEAAQAP 320
Y PY G+ YG G + G Y N PY NP G G + R AQAP
Sbjct: 238 YPPYGGSGYGTGYGYGSNGVGYGGFGGYGNPAGAPYGNPSVPGAGFGSGP-RSSWGAQAP 296
Query: 321 S 323
S
Sbjct: 297 S 297
>At3g57170.1 68416.m06365 N-acetylglucosaminyl transferase component
family protein / Gpi1 family protein similar to
SP|O14357 N-acetylglucosaminyl-phosphatidylinositol
biosynthetic protein gpi1 {Schizosaccharomyces pombe};
contains Pfam profile PF05024: N-acetylglucosaminyl
transferase component (Gpi1)
Length = 560
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 403 SITLSNQRTRSSAPLKRPNWLTPL 474
S++ SN ++ APLK+P W+ L
Sbjct: 49 SLSFSNSSPQTKAPLKKPKWVDDL 72
>At4g26830.1 68417.m03863 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 448
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 90 IMKVMYAFVMMSCA-LLVQAYPYNPYYGNVD--SLSYGSGDSNRGGL 221
++K M A + + + L+V AYP+ Y N D SL Y N G +
Sbjct: 179 VVKPMLALLQQTSSYLMVNAYPFFAYAANADKISLDYALFKENAGNI 225
>At5g28120.1 68418.m03396 hypothetical protein
Length = 506
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 162 YYGNVDSLSYGSGDSNRGGLVMSR 233
Y GN+D + +G GD ++ L+ SR
Sbjct: 122 YVGNIDRVRWGPGDKDQKTLIKSR 145
>At5g28110.1 68418.m03395 hypothetical protein
Length = 493
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 162 YYGNVDSLSYGSGDSNRGGLVMSR 233
Y GN+D + +G GD ++ L+ SR
Sbjct: 122 YVGNIDRVRWGPGDKDQKTLIKSR 145
>At5g18510.1 68418.m02185 hypothetical protein
Length = 702
Score = 27.5 bits (58), Expect = 7.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 426 NPIFSPTQATELADPTEKIE 485
+P+FSP + +E+ D EK+E
Sbjct: 137 SPVFSPLECSEMRDSAEKLE 156
>At4g37130.1 68417.m05258 hydroxyproline-rich glycoprotein family
protein
Length = 513
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 330 QVYIPDRRRQTLADTSYVPQQENEVYYPQQPE--NPIFSPTQ 449
Q P QT + + PQQ N ++ QP+ N IFS +Q
Sbjct: 8 QQQTPQPLFQTQQTSLFQPQQTNSIFSQSQPQQTNSIFSQSQ 49
>At4g26930.1 68417.m03875 myb family transcription factor (MYB97)
contains Pfam profile: PF00249 myb-like DNA-binding
domain ;similar to anther-specific myb-related protein 2
GI:11066263 from [Nicotiana tabacum]
Length = 389
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +3
Query: 348 RRRQTLADTSYVPQQENEVYYPQQPENPIFSPTQATELADP 470
R+ L Y + YPQQP +P+ S T A+ P
Sbjct: 124 RQGLPLYPPEYSQNNHQQQMYPQQPSSPLPSQTPASSFTFP 164
>At4g17615.1 68417.m02634 calcineurin B-like protein 1 (CBL1)
identical to calcineurin B-like protein 1 (GI:3309082)
[Arabidopsis thaliana]
Length = 213
Score = 27.1 bits (57), Expect = 9.6
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = -3
Query: 605 ISDSLLRLGLLNFEYFRLW*FRSGRRFGSLGNRY-------QSGGVQF-DLFSGVSQFGR 450
IS S++ GL+N E F+L F+S +R NR + G + F D ++ F
Sbjct: 42 ISSSVVDDGLINKEEFQLALFKSRKRENIFANRIFDMFDVKRKGVIDFGDFVRSLNVFHP 101
Query: 449 LSGAEDRVLWLLRVID 402
+ ED++ + R+ D
Sbjct: 102 NASLEDKIDFTFRLYD 117
>At3g60370.1 68416.m06752 immunophilin / FKBP-type peptidyl-prolyl
cis-trans isomerase family protein SP:Q9M222; similar to
FKBP-type peptidyl-prolyl cis-trans isomerase fkpA
precursor (PPiase) (Rotamase)(SP:Q8X880) [Escherichia
coli O157:H7] ; contains Pfam PF00254: peptidyl-prolyl
cis-trans isomerase, FKBP-type
Length = 242
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 289 CTASPKPHRR-LQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQR 426
C+ S +P + L R Y++VA+ L +PA + KTKS + ++R
Sbjct: 32 CSLSEEPKDQCLSRRSLVYVLVASPCLLLPALSSSAKTKSKSPYDER 78
>At3g54100.1 68416.m05981 expressed protein similar to axi 1
[Nicotiana tabacum] GI:559921; contains Pfam profile
PF03138: Plant protein family
Length = 638
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = +1
Query: 256 PELWAVVWP---RSCTASPKPHRRLQRARCTYLIVAA 357
PE+W R C PK + RLQR YL+V A
Sbjct: 194 PEIWQKPESGNYRQCVTRPKNYTRLQRQTNGYLVVHA 230
>At2g28700.1 68415.m03488 MADS-box protein-related contains
INTERPRO: IPR002100 MADS-box domain
Length = 329
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +3
Query: 318 PSTGQVYIPDRRRQTLAD---TSYVPQQENEVYYPQQPENPIFSPTQ 449
P Q IP + D ++++P EVY P ++ +++P Q
Sbjct: 248 PDMNQSIIPSNQGAEHVDFLESNFLPNNNQEVYIPVMDQDEVYNPNQ 294
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,556,111
Number of Sequences: 28952
Number of extensions: 276424
Number of successful extensions: 807
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1206913392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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