Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10g10r
(773 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC965.09 |||nitrilase |Schizosaccharomyces pombe|chr 3|||Manual 75 9e-15
SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr 1|||... 50 4e-07
SPBC651.02 |||nitrilase |Schizosaccharomyces pombe|chr 2|||Manual 38 0.001
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 28 1.7
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 27 2.3
SPAC637.10c |rpn10|pus1|19S proteasome regulatory subunit Rpn10|... 27 2.3
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 27 3.0
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 27 3.9
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 27 3.9
SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating |S... 26 5.2
SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|c... 26 5.2
SPBC27.08c |sua1|SPBC28F2.01c|sulfate adenylyltransferase |Schiz... 26 5.2
SPBC11G11.07 ||SPBC18H10.01|karyopherin|Schizosaccharomyces pomb... 25 9.1
>SPCC965.09 |||nitrilase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 272
Score = 75.4 bits (177), Expect = 9e-15
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 3/222 (1%)
Frame = -3
Query: 771 LAIKYAMVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYME 592
LA KY + I+ E++EK S+I++N+ + I++ GN+ G +RK H+ F+ + +
Sbjct: 76 LAAKYHVNIIYGFPEKEEKQSNIIYNSCIYITENGNLGGVYRKVHL-----FDTERKHFK 130
Query: 591 GNTGHPVFATRYGKIAVNICFGRHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYM--WN 418
+ P+F T +GK+ V IC+ + NGA+++ +A + Y W+
Sbjct: 131 KGSDFPIFETSFGKLGVMICWDTAFPEVARIHALNGADLL-----VVATNWENPYSDDWD 185
Query: 417 VEARNAAITNCYFTAAINRVGYEEFPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPG 238
+ + A NC A NRVG +E + F+G S GP G
Sbjct: 186 LVTKARAFENCIPLVAANRVGTDEKLS----------------FFGHSKIIGPTGKVIKA 229
Query: 237 LSRTRDGLLIAAVDLNLNRQIKDRRCYYMTQRL-DMYVNSLS 115
L ++G++ VDL+ + ++ + R+ D+Y LS
Sbjct: 230 LDEEKEGVISYTVDLDDAKPLRKNYYTFFEDRMPDLYKRLLS 271
>SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 322
Score = 50.0 bits (114), Expect = 4e-07
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Frame = -3
Query: 720 EKHSDILWNTAVVISDTGNVIGKHRKNH-----IPRVGDFNESNYYMEGNTGHPVFATRY 556
E+ L+NTA+V +G +I HRK H IP F ES+ G+ + T Y
Sbjct: 129 ERKDGKLYNTAMVFDPSGKLIAVHRKIHLFDIDIPGGVSFRESDSLSPGD-AMTMVDTEY 187
Query: 555 GKIAVNICFGRHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFT 376
GK + IC+ M+ +NG ++ P A G W + AR A+ N F
Sbjct: 188 GKFGLGICYDIRFPELAMIAARNGCSVMIYPGAFNLSTG--PLHWELLARARAVDNEMFV 245
Query: 375 A 373
A
Sbjct: 246 A 246
>SPBC651.02 |||nitrilase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 276
Score = 38.3 bits (85), Expect = 0.001
Identities = 56/216 (25%), Positives = 84/216 (38%), Gaps = 9/216 (4%)
Frame = -3
Query: 750 VIVSSILERDEKHSDILWNTAVVISDT-GNVIGKHRKNHIPRVGDFN-----ESNYYMEG 589
+ V+ + K + L N+++ I G +I ++ K H+ V N ESN + G
Sbjct: 78 IFVNICVHEPSKVKNKLLNSSLFIEPLHGEIISRYSKAHLFDVEIKNGPTLKESNTTLRG 137
Query: 588 NTGHPVFATRYGKIAVNICFGRHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEA 409
P T GK+ ICF + GA I+ PSA G + W V
Sbjct: 138 EAILPPCKTPLGKVGSAICFDIRFPEQAIKLRNMGAHIITYPSAFTEKTGAAH--WEVLL 195
Query: 408 RNAAI-TNCYFTAAINRVGYEEFPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLS 232
R A+ + CY A + GK H + YG S P G S
Sbjct: 196 RARALDSQCYVIA--------------PAQGGK--HNEKRASYGHSMIVDPWGTVIAQYS 239
Query: 231 --RTRDGLLIAAVDLNLNRQIKDRRCYYMTQRLDMY 130
+ +GL+ A +DLNL + R + +R D+Y
Sbjct: 240 DISSPNGLIFADLDLNLVDHV--RTYIPLLRRNDLY 273
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 27.9 bits (59), Expect = 1.7
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = -3
Query: 753 MVIVSSILERDEKHSDIL 700
+++VS++LE DEKH D++
Sbjct: 998 LIVVSNLLEMDEKHVDVV 1015
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 514 DVVPSEADVHRDLAVSGRKYRMAGVTFHVVV 606
DVVP A R L + Y AG TFH V+
Sbjct: 25 DVVPKTAANFRALCTGEKGYGYAGSTFHRVI 55
>SPAC637.10c |rpn10|pus1|19S proteasome regulatory subunit
Rpn10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 243
Score = 27.5 bits (58), Expect = 2.3
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 389 FVIAAFLASTFHMYSLPPSPAIVAD 463
F+ AA + + H+ S+PPSP +++D
Sbjct: 156 FIDAANSSDSCHLVSIPPSPQLLSD 180
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 506 QFKTWCRPKQMFTAILPYLVANTGWPVLPS 595
+F T K +FTA+ P+L A T + ++PS
Sbjct: 1521 RFPTRVLCKPVFTAVPPFLFAGTDFALIPS 1550
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 3.9
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -2
Query: 187 EQTDQRQTLLLHDPTPGHVREQSQQSTRAGLQAAGRTRK*KAILSDPVPTLTTE 26
+Q + ++ + + PT E++ Q+ RA L A+ K + P PT TE
Sbjct: 552 KQAKEMESKMSNSPTQKSKTEENNQAVRAILDASATMEKQYDLHRLPTPTSQTE 605
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 26.6 bits (56), Expect = 3.9
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 125 TVSAKYSSWITSRRSYTKMKSNFKRSRSNIDHRNLCILRRI 3
T S+ YSS + RSY++ ++ +SRS R++ + I
Sbjct: 629 TYSSSYSSTYSRGRSYSRSTRSYSKSRSYSRSRSVTPINNI 669
>SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 26.2 bits (55), Expect = 5.2
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 566 ANTGWPVLPSM**LDSLKSPTLGMWFLR-CFPITFPVSLITTAVFQSMSECFSSLSN 733
A+ G P++ + LD+ G W + + PVSLIT AVF + C SSL +
Sbjct: 247 ADDGKPLVEKI--LDAAGQKGTGKWTAQNALEMGTPVSLITEAVF---ARCLSSLKS 298
>SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 547
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 136 HVREQSQQSTRAGLQAAGRTRK*KAILSDPVPTLTTEIY 20
H R S+Q R+GL + TR + LSD + T+ Y
Sbjct: 96 HSRSASRQRRRSGLSRSNATRYSRRSLSDWLETIRENNY 134
>SPBC27.08c |sua1|SPBC28F2.01c|sulfate adenylyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 541 HRDLAVSGRKYRMAGVTFHVVVGFVKIAD 627
HR+L V K A V H VVG K D
Sbjct: 202 HRELTVRAAKQHGARVLIHPVVGMTKPGD 230
>SPBC11G11.07 ||SPBC18H10.01|karyopherin|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 955
Score = 25.4 bits (53), Expect = 9.1
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +1
Query: 43 ERDRLKLLFIFVYDLRLVIQLEYFAE 120
E + +K F F +DL+ +++L+ +AE
Sbjct: 325 ELEAIKFTFAFWWDLKQMVELDVYAE 350
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,008,986
Number of Sequences: 5004
Number of extensions: 60581
Number of successful extensions: 184
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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