Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10g10r
(773 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 321 3e-88
Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF038612-1|AAB92043.1| 348|Caenorhabditis elegans Hypothetical ... 29 3.7
AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical ... 29 4.9
AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical ... 29 4.9
AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical ... 29 4.9
AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical ... 29 4.9
AF016416-8|AAB65271.1| 388|Caenorhabditis elegans Hypothetical ... 28 6.4
Z92828-1|CAB07337.1| 512|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z35604-6|CAA84681.1| 305|Caenorhabditis elegans Hypothetical pr... 28 8.5
U80453-3|AAV58885.1| 434|Caenorhabditis elegans Serine palmitoy... 28 8.5
U80453-2|AAK31446.1| 458|Caenorhabditis elegans Serine palmitoy... 28 8.5
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 321 bits (789), Expect = 3e-88
Identities = 147/233 (63%), Positives = 175/233 (75%)
Frame = -3
Query: 771 LAIKYAMVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYME 592
LA+K+ +VI+S ILERDE+ D++WNTAVVIS TG VIG+ RKNHIPRVGDFNES YYME
Sbjct: 156 LAVKHDIVIISPILERDEEKDDVIWNTAVVISHTGRVIGRSRKNHIPRVGDFNESTYYME 215
Query: 591 GNTGHPVFATRYGKIAVNICFGRHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVE 412
GHPVF T+YG+I +NIC+GRHH NWMM+ NGAEI+FNPSAT+ SE +W +E
Sbjct: 216 STLGHPVFETKYGRIGINICYGRHHPQNWMMYALNGAEIIFNPSATVGAL--SEPLWGIE 273
Query: 411 ARNAAITNCYFTAAINRVGYEEFPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLS 232
ARNAAI N FT INRVG E FPNEFTS +G+PAHKD G FYGSSY PDG R P LS
Sbjct: 274 ARNAAIANHVFTVGINRVGTEVFPNEFTSGNGQPAHKDFGHFYGSSYIAAPDGSRTPALS 333
Query: 231 RTRDGLLIAAVDLNLNRQIKDRRCYYMTQRLDMYVNSLSKVLELDYKPQVVHE 73
R R+G+LIA +DLNL RQ KD + MT RLDMY +++V DY+P + E
Sbjct: 334 RVREGVLIAELDLNLCRQCKDAWGFRMTNRLDMYAQKITEVSNPDYRPDIRRE 386
>Z81512-1|CAB04173.1| 601|Caenorhabditis elegans Hypothetical
protein F25C8.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/60 (23%), Positives = 31/60 (51%)
Frame = +1
Query: 409 SFNVPHVLAAAFSGDRR*RIEDDLRSVLSEHHPVQDVVPSEADVHRDLAVSGRKYRMAGV 588
SFNV + + G++R + ++ + +H +QD+ P+ + RD + ++AG+
Sbjct: 21 SFNVDKLTEYYYGGEKRLKARREVEKCVEDHKELQDLKPTPF-MSRDELIDNSVRKLAGM 79
>AF038612-1|AAB92043.1| 348|Caenorhabditis elegans Hypothetical
protein F13B6.1 protein.
Length = 348
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 598 VVVGFVKIADSRNVVLAMFPDHVSGVTNYNR 690
V+ GFV + DS+++V D + G+TNY++
Sbjct: 156 VLNGFVGLPDSKDMVQFFDSDSIEGLTNYDQ 186
>AF040660-8|AAN65288.1| 594|Caenorhabditis elegans Hypothetical
protein W05G11.6d protein.
Length = 594
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 507 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 343
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 387
>AF040660-7|AAN65287.1| 366|Caenorhabditis elegans Hypothetical
protein W05G11.6c protein.
Length = 366
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 507 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 343
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 47 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 102
>AF040660-6|AAN65286.1| 541|Caenorhabditis elegans Hypothetical
protein W05G11.6b protein.
Length = 541
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 507 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 343
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 222 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 277
>AF040660-5|AAC71149.1| 651|Caenorhabditis elegans Hypothetical
protein W05G11.6a protein.
Length = 651
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 507 WMMFGQNGAEIVFNPSATIAGEG-GSEYMWNVEARNAAITNCYFTAAINRVGYEEF 343
WM FG +G NP A G G+ + N A + N FT E F
Sbjct: 332 WMKFGADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYF 387
>AF016416-8|AAB65271.1| 388|Caenorhabditis elegans Hypothetical
protein F29A7.1 protein.
Length = 388
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = -3
Query: 699 WNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYM 595
WN + + D ++ + H+ R GD+ NY++
Sbjct: 266 WNKKIAMKDVPFIVYSPQFEHVIRGGDWENENYFL 300
>Z92828-1|CAB07337.1| 512|Caenorhabditis elegans Hypothetical
protein C37A5.1 protein.
Length = 512
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 647 RCFPITFPVSLITTAVFQSMSECFSSLSNIEDT-ITIAYLM 766
+C P+TF ++ T + F+++ IE+T I IA L+
Sbjct: 75 KCVPLTFMLAFFVTIIVDRWKNMFANIGFIENTAIAIATLV 115
>Z35604-6|CAA84681.1| 305|Caenorhabditis elegans Hypothetical
protein ZK1058.6 protein.
Length = 305
Score = 27.9 bits (59), Expect = 8.5
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = -3
Query: 771 LAIKYAMVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYME 592
LA + + IV ++ER+ + L+ + S +G +GKHRK +P E + +
Sbjct: 90 LAAQNNIHIVIGVVERE---ASTLYCSVFFYSPSG-YLGKHRKL-LPTA---LERCVWGQ 141
Query: 591 GN-TGHPVFATRYGKIAVNICFGRHHVLNWMMFGQNGAEIVFNPS 460
G+ + PVF+T GKI IC+ + L M +I P+
Sbjct: 142 GDGSTMPVFSTSVGKIGSAICWENYMPLYRMTLYSKEIQIYLAPT 186
>U80453-3|AAV58885.1| 434|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 1, isoform b protein.
Length = 434
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 496 EHHPVQDVVPSEADVHRDLAVSGRKY-RMAGVTFHVVVGFVKIAD 627
+ HPV + ++ + +D+++ G KY MA F +G +I D
Sbjct: 39 QDHPVLNPKYADGKMTKDVSIDGEKYLNMASTNFLSFIGVKRIED 83
>U80453-2|AAK31446.1| 458|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 1, isoform a protein.
Length = 458
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 496 EHHPVQDVVPSEADVHRDLAVSGRKY-RMAGVTFHVVVGFVKIAD 627
+ HPV + ++ + +D+++ G KY MA F +G +I D
Sbjct: 63 QDHPVLNPKYADGKMTKDVSIDGEKYLNMASTNFLSFIGVKRIED 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,023,852
Number of Sequences: 27780
Number of extensions: 357691
Number of successful extensions: 1068
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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