Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g08r
         (790 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   4.9  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.9  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.9  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   4.9  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.9  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   6.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   6.4  

>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 128 GRLLKPLLTRETIPPYQPLYPRC 196
           GRLL  L  R T  PY  L  +C
Sbjct: 82  GRLLHDLKGRTTSVPYDALTGQC 104


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 128 GRLLKPLLTRETIPPYQPLYPRC 196
           GRLL  L  R T  PY  L  +C
Sbjct: 82  GRLLHDLKGRTTSVPYDALTGQC 104


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 128 GRLLKPLLTRETIPPYQPLYPRC 196
           GRLL  L  R T  PY  L  +C
Sbjct: 82  GRLLHDLKGRTTSVPYDALTGQC 104


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +1

Query: 97  CANIKPLSSKWPSTEAASNQRNNTTVSTL 183
           C N  P+SSK  ++++A  Q+++  + TL
Sbjct: 139 CVNGIPVSSKTLASQSAYVQQDDLFIGTL 167


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +1

Query: 97  CANIKPLSSKWPSTEAASNQRNNTTVSTL 183
           C N  P+SSK  ++++A  Q+++  + TL
Sbjct: 139 CVNGIPVSSKTLASQSAYVQQDDLFIGTL 167


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 512 RICRLKDKHQHPLITKDEGILKQARKTYL 598
           + C LKD H      K+ G  +   KT++
Sbjct: 139 KTCSLKDSHCDHTTCKNGGTCQDLGKTFM 167


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 37  FSNFCGFIFDLLVYLT 84
           +SNF  F+FD++  +T
Sbjct: 70  YSNFSVFLFDIITIVT 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,734
Number of Sequences: 336
Number of extensions: 4339
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)