Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g08f
         (579 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    25   0.46 
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   1.9  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   4.3  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   5.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.6  

>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 139 LSAAHWKLTNKNGSIAVRGSVPGGVYTDLNKAGIIGDVLYGFNDVLS 279
           ++ + W+  N+N   A+R  + GG   D  K   IG   YG + +LS
Sbjct: 222 VNESDWQQQNRNADAAIRYWLDGG--ADPQKV-TIGIAFYGHHFILS 265


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 217 YIPHPAQSRGLQSIHSCWSISNEQH 143
           Y PH A   GLQ +H    +++  H
Sbjct: 26  YEPHVAHRPGLQGLHHSPHLNHAMH 50


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 201 AGWGIYRSQQSGYH 242
           A W IYR  +  YH
Sbjct: 31  ASWAIYRPDKGEYH 44


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 276 EHVIEAIQDISNDTRFVEIGIY 211
           EH+ E I+ I N      +GIY
Sbjct: 49  EHIFERIRTIYNQFSTPYVGIY 70


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 221 SVYTPPGTEPRTAIDPFLL 165
           SV  PP  +PRT   P +L
Sbjct: 256 SVSQPPNRKPRTDFKPQVL 274


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,673
Number of Sequences: 336
Number of extensions: 3049
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)