Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g08f
         (579 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   6.7  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   6.7  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   6.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   6.7  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   8.8  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 438 EHTARATNWGIVYFHERHCINTIEHQ 361
           E ++ +   GIV  H++ CIN +  +
Sbjct: 276 EPSSTSKKSGIVRSHQQSCINRVARE 301


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +3

Query: 360 LGVRWY*YSGVRGNKQYPSW*HEQYVREIRV*CQGTNADRRK 485
           +GVR Y  S +   K+ P    + Y + ++V     NA+ R+
Sbjct: 349 VGVRTYLESELAKAKERPKLRKDMYEKMVQVDPTAPNAEERR 390


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +3

Query: 360 LGVRWY*YSGVRGNKQYPSW*HEQYVREIRV*CQGTNADRRK 485
           +GVR Y  S +   K+ P    + Y + ++V     NA+ R+
Sbjct: 264 VGVRTYLESELAKAKERPKLRKDMYEKMVQVDPTAPNAEERR 305


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +3

Query: 360 LGVRWY*YSGVRGNKQYPSW*HEQYVREIRV*CQGTNADRRK 485
           +GVR Y  S +   K+ P    + Y + ++V     NA+ R+
Sbjct: 583 VGVRTYLESELAKAKERPKLRKDMYEKMVQVDPTAPNAEERR 624


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 205 PAQSRGLQSIHSCWSISNE 149
           P + RGL SI   W ++ E
Sbjct: 114 PCEHRGLVSIIDGWELNGE 132


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,361
Number of Sequences: 438
Number of extensions: 3371
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)