Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g07r
         (415 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   1.4  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   3.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   5.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   5.5  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 393 CAQRCSRRHHGVTRSN 346
           C ++C RRH  V  SN
Sbjct: 106 CMRKCPRRHRPVCASN 121


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 37  VKTEKGFFTQKVGYICFGST 96
           V  +K  FT+ +GY+ F ST
Sbjct: 193 VPEDKCPFTEHLGYLIFSST 212


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 212 QLNLYVLFFSVRFFLEPN 265
           QLNL +L   V+ F+ PN
Sbjct: 118 QLNLPILKDGVQIFIAPN 135


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 212 QLNLYVLFFSVRFFLEPN 265
           QLNL +L   V+ F+ PN
Sbjct: 156 QLNLPILKDGVQIFIAPN 173


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,343
Number of Sequences: 438
Number of extensions: 1773
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)