Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g07f
         (460 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    26   0.73 
AY146725-1|AAO12085.1|  155|Anopheles gambiae odorant-binding pr...    23   6.8  
AF437889-1|AAL84184.1|  155|Anopheles gambiae odorant binding pr...    23   6.8  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.8 bits (54), Expect = 0.73
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = +2

Query: 302  VSLGIGSTSEADVANFLRKKAFFSLNIIFGIVRIFYVYCDVL 427
            +   + +T+   VA+++R+K      I+  +   FY + DVL
Sbjct: 1158 IDAALDNTNIGKVASYIREKTTNLQTIVISLKEEFYCHADVL 1199


>AY146725-1|AAO12085.1|  155|Anopheles gambiae odorant-binding
           protein AgamOBP6 protein.
          Length = 155

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 350 LRKKAFFSLNIIFGIVRIFYVYC 418
           +   AF+S N +  +V +  VYC
Sbjct: 1   MTSNAFYSSNTVTWVVAVIGVYC 23


>AF437889-1|AAL84184.1|  155|Anopheles gambiae odorant binding
           protein protein.
          Length = 155

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 350 LRKKAFFSLNIIFGIVRIFYVYC 418
           +   AF+S N +  +V +  VYC
Sbjct: 1   MTSNAFYSSNTVTWVVAVIGVYC 23


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,372
Number of Sequences: 2352
Number of extensions: 6582
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)