Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g06f
         (311 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    23   0.99 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   1.3  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   1.3  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   1.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   2.3  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   3.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   3.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   4.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   4.0  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    20   6.9  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    19   9.2  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    19   9.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    19   9.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    19   9.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    19   9.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    19   9.2  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    19   9.2  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    19   9.2  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    19   9.2  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    19   9.2  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.6 bits (46), Expect = 0.99
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +1

Query: 73  IRC*CFSTRRDGGCGGRNISLYLVARKEGSPTARSSRRESA 195
           + C  +S R   G   R   +     K+G+PTA   R  +A
Sbjct: 194 VYCTRYSDRPSSGRSPRTRRVKKPGAKQGAPTAEEKRPRTA 234


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 141 QVKRNVPTATTAIAPSAK 88
           QVKRNVP  T    P A+
Sbjct: 201 QVKRNVPKPTVPKIPPAE 218


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 262 CTRKYYFANKIIFPLHYVLLL 200
           C++K +  N  IF L+ VLLL
Sbjct: 108 CSKKSFRMNFAIFNLYMVLLL 128


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 141 QVKRNVPTATTAIAPSAK 88
           QVKRNVP  T    P A+
Sbjct: 201 QVKRNVPKPTVPKIPPAE 218


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 170 AVGEPSFLATK*REMFRPPQPPS 102
           +V EP+   T   E  RPP  PS
Sbjct: 398 SVPEPTISTTPRPEWARPPSTPS 420


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 227 FSAALCSATIFADSRLE 177
           F  A+C+ T+FA  + E
Sbjct: 9   FILAICACTVFAQQQAE 25


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
 Frame = -3

Query: 306 FLIYNIILLDSKHKRVHV----SIILRTKLFFRCTMFCYY 199
           F ++ + LL S +  VH+      I+ T  F  CT + YY
Sbjct: 66  FNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYY 105



 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 250 YYFANKIIFPLHYVLLL 200
           Y++   IIF +H + LL
Sbjct: 148 YFYCAFIIFTVHLLFLL 164


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 253  KYYFANKIIFPLHYVLLLSSPIRALSSVRWG 161
            KY     +  P  Y+LL+   +  +++V WG
Sbjct: 1003 KYGVIYYVTVPSMYLLLVIYSVFNMNNVSWG 1033


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 253  KYYFANKIIFPLHYVLLLSSPIRALSSVRWG 161
            KY     +  P  Y+LL+   +  +++V WG
Sbjct: 1003 KYGVIYYVTVPSMYLLLVIYSVFNMNNVSWG 1033


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 19.8 bits (39), Expect = 6.9
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 141 QVKRNVPTAT 112
           QVKRNVP  T
Sbjct: 201 QVKRNVPKPT 210


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 225 KIILFAK*YLRVHACVYCQVKLYYKSK 305
           KI++FA   L  +     +V  YY SK
Sbjct: 2   KILIFAFLALAAYVAADNKVVCYYNSK 28


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 179 ELRAVGEPSFLATK*REMF 123
           E+RA   P+F ++K + M+
Sbjct: 86  EMRATLSPAFTSSKIKNMY 104


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 223  PLHYVLLLSSPIRALSSVRWG 161
            P  Y+LL+   I  L+ V WG
Sbjct: 1040 PSMYLLLILYSIINLNVVSWG 1060


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 223  PLHYVLLLSSPIRALSSVRWG 161
            P  Y+LL+   I  L+ V WG
Sbjct: 1040 PSMYLLLILYSIINLNVVSWG 1060


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 223  PLHYVLLLSSPIRALSSVRWG 161
            P  Y+LL+   I  L+ V WG
Sbjct: 1040 PSMYLLLILYSIINLNVVSWG 1060


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 223  PLHYVLLLSSPIRALSSVRWG 161
            P  Y+LL+   I  L+ V WG
Sbjct: 1040 PSMYLLLILYSIINLNVVSWG 1060


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 244 FANKIIFPLHYVLLLSSPI 188
           FA  I+F L +   L+SPI
Sbjct: 136 FAGLIVFILFFAQGLTSPI 154


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 102 RWRLWRSEHFSLLGGKKGRFPHR 170
           +W L      ++   K+ RFPHR
Sbjct: 3   KWVLKVGNVLAMTPTKEKRFPHR 25


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 102 RWRLWRSEHFSLLGGKKGRFPHR 170
           +W L      ++   K+ RFPHR
Sbjct: 3   KWVLKVGNVLAMTPTKEKRFPHR 25


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 70  VAALRIRILGHRKMAI 23
           V+  + ++LGHR+ A+
Sbjct: 212 VSLPQFKVLGHRRRAV 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,556
Number of Sequences: 336
Number of extensions: 1412
Number of successful extensions: 21
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)