BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10g05f (615 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_55418| Best HMM Match : GWT1 (HMM E-Value=1.5) 30 1.7 SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7 SB_58268| Best HMM Match : Extensin_2 (HMM E-Value=0.002) 30 1.7 SB_39819| Best HMM Match : Extensin_2 (HMM E-Value=1) 30 1.7 SB_33746| Best HMM Match : MAM (HMM E-Value=8.4e-13) 29 2.3 SB_48608| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0 SB_40674| Best HMM Match : Extensin_2 (HMM E-Value=0.19) 29 3.0 SB_31262| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0 SB_9731| Best HMM Match : Lig_chan (HMM E-Value=3.7e-05) 29 3.0 SB_49054| Best HMM Match : Chordopox_A30L (HMM E-Value=4.1) 29 4.0 SB_52408| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2 SB_33920| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2 SB_27872| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2 SB_10252| Best HMM Match : tRNA-synt_2b (HMM E-Value=3.2e-32) 28 5.2 SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2 SB_20304| Best HMM Match : Vicilin_N (HMM E-Value=4.6) 28 6.9 SB_12810| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9 SB_45611| Best HMM Match : p450 (HMM E-Value=0) 27 9.1 SB_27646| Best HMM Match : CbiK (HMM E-Value=2.2) 27 9.1 >SB_55418| Best HMM Match : GWT1 (HMM E-Value=1.5) Length = 260 Score = 29.9 bits (64), Expect = 1.7 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = -1 Query: 285 W*AKSMVFLLPFSIRRFTASLITSPFFSFRYSEHLAIAVSYSPMT 151 W + +F++ SI + A+L F F H+ AV+YS T Sbjct: 127 WQSSRFMFIMRLSILSYAAALFHDQGFEFSLGLHILAAVAYSVRT 171 >SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1021 Score = 29.9 bits (64), Expect = 1.7 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = +2 Query: 164 YETAIAKCSEYLKEK--KGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFP 331 Y + I K E+ KEK KG+ K R E GKR A +D E +K +FP Sbjct: 261 YPSLIDKLQEHEKEKELKGKRKKSKTSRSPEKGKREEEKDALLKQEEDEIERMKQFFP 318 >SB_58268| Best HMM Match : Extensin_2 (HMM E-Value=0.002) Length = 458 Score = 29.9 bits (64), Expect = 1.7 Identities = 14/34 (41%), Positives = 14/34 (41%) Frame = +3 Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548 P TK PP K T Y R CPP T T Sbjct: 136 PLTKCTNYRKRRCPPLTKCTNYRKRRCPPLTKCT 169 Score = 29.9 bits (64), Expect = 1.7 Identities = 14/34 (41%), Positives = 14/34 (41%) Frame = +3 Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548 P TK PP K T Y R CPP T T Sbjct: 150 PLTKCTNYRKRRCPPLTKCTNYRKRRCPPLTKCT 183 Score = 29.9 bits (64), Expect = 1.7 Identities = 14/34 (41%), Positives = 14/34 (41%) Frame = +3 Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548 P TK PP K T Y R CPP T T Sbjct: 164 PLTKCTNYRKRRCPPLTKCTNYRKRRCPPLTKCT 197 Score = 29.9 bits (64), Expect = 1.7 Identities = 14/34 (41%), Positives = 14/34 (41%) Frame = +3 Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548 P TK PP K T Y R CPP T T Sbjct: 178 PLTKCTNYRKRRCPPLTKCTNYRKRRCPPLTRCT 211 Score = 29.1 bits (62), Expect = 3.0 Identities = 14/34 (41%), Positives = 14/34 (41%) Frame = +3 Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548 P TK PP K T Y R CPP T T Sbjct: 220 PLTKCTYYRKRRCPPLTKCTNYRKRRCPPLTRCT 253 Score = 29.1 bits (62), Expect = 3.0 Identities = 13/34 (38%), Positives = 14/34 (41%) Frame = +3 Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548 P TK PP + T Y R CPP T T Sbjct: 290 PLTKRTNYRKKRYPPLTRCTNYRKRRCPPLTRCT 323 Score = 28.7 bits (61), Expect = 4.0 Identities = 13/34 (38%), Positives = 14/34 (41%) Frame = +3 Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548 P T+ PP K T Y R CPP T T Sbjct: 122 PLTRCTNYRKRRCPPLTKCTNYRKRRCPPLTKCT 155 Score = 28.7 bits (61), Expect = 4.0 Identities = 13/34 (38%), Positives = 14/34 (41%) Frame = +3 Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548 P TK PP + T Y R CPP T T Sbjct: 192 PLTKCTNYRKRRCPPLTRCTNYRKRRCPPLTKCT 225 Score = 28.7 bits (61), Expect = 4.0 Identities = 13/34 (38%), Positives = 14/34 (41%) Frame = +3 Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548 P TK PP + T Y R CPP T T Sbjct: 234 PLTKCTNYRKRRCPPLTRCTNYLKRRCPPLTRCT 267 Score = 28.3 bits (60), Expect = 5.2 Identities = 11/21 (52%), Positives = 11/21 (52%) Frame = +3 Query: 486 PPCWKTTEYTSRSCPPKTNST 548 PP K T Y R CPP T T Sbjct: 275 PPLTKCTNYLKRRCPPLTKRT 295 Score = 28.3 bits (60), Expect = 5.2 Identities = 14/34 (41%), Positives = 14/34 (41%) Frame = +3 Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548 P TK PP K T Y R CPP T T Sbjct: 416 PLTKGNYYRKRRCPPLTKGTNYRKRRCPPLTRCT 449 Score = 27.9 bits (59), Expect = 6.9 Identities = 14/37 (37%), Positives = 14/37 (37%) Frame = +3 Query: 429 KLHSVTPKTKPARKSPGSLPPCWKTTEYTSRSCPPKT 539 K P TK PP K T Y R CPP T Sbjct: 46 KTRRCNPLTKGNYYRKRRCPPLTKCTNYRKRRCPPLT 82 Score = 27.9 bits (59), Expect = 6.9 Identities = 13/34 (38%), Positives = 14/34 (41%) Frame = +3 Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548 P T+ PP K T Y R CPP T T Sbjct: 206 PLTRCTNYRKRRCPPLTKCTYYRKRRCPPLTKCT 239 >SB_39819| Best HMM Match : Extensin_2 (HMM E-Value=1) Length = 259 Score = 29.9 bits (64), Expect = 1.7 Identities = 14/34 (41%), Positives = 14/34 (41%) Frame = +3 Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548 P TK PP K T Y R CPP T T Sbjct: 189 PLTKCTNYRKRRCPPLTKCTNYRKRRCPPLTRCT 222 Score = 29.5 bits (63), Expect = 2.3 Identities = 14/34 (41%), Positives = 14/34 (41%) Frame = +3 Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548 P TK PP K T Y R CPP T T Sbjct: 147 PLTKCTNYLKRRCPPLTKCTNYRKRRCPPLTRCT 180 Score = 28.7 bits (61), Expect = 4.0 Identities = 13/34 (38%), Positives = 14/34 (41%) Frame = +3 Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548 P TK PP + T Y R CPP T T Sbjct: 35 PLTKCTNYRKRRCPPLTRCTNYRKRRCPPLTRCT 68 Score = 28.7 bits (61), Expect = 4.0 Identities = 13/34 (38%), Positives = 14/34 (41%) Frame = +3 Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548 P TK PP + T Y R CPP T T Sbjct: 161 PLTKCTNYRKRRCPPLTRCTNYRKRRCPPLTKCT 194 Score = 28.7 bits (61), Expect = 4.0 Identities = 13/34 (38%), Positives = 14/34 (41%) Frame = +3 Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548 P T+ PP K T Y R CPP T T Sbjct: 175 PLTRCTNYRKRRCPPLTKCTNYRKRRCPPLTKCT 208 Score = 28.3 bits (60), Expect = 5.2 Identities = 11/21 (52%), Positives = 11/21 (52%) Frame = +3 Query: 486 PPCWKTTEYTSRSCPPKTNST 548 PP K T Y R CPP T T Sbjct: 34 PPLTKCTNYRKRRCPPLTRCT 54 Score = 28.3 bits (60), Expect = 5.2 Identities = 11/21 (52%), Positives = 11/21 (52%) Frame = +3 Query: 486 PPCWKTTEYTSRSCPPKTNST 548 PP K T Y R CPP T T Sbjct: 146 PPLTKCTNYLKRRCPPLTKCT 166 Score = 27.5 bits (58), Expect = 9.1 Identities = 12/34 (35%), Positives = 14/34 (41%) Frame = +3 Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548 P T+ PP + T Y R CPP T T Sbjct: 49 PLTRCTNYRKRRCPPLTRCTNYRKRRCPPLTKCT 82 >SB_33746| Best HMM Match : MAM (HMM E-Value=8.4e-13) Length = 618 Score = 29.5 bits (63), Expect = 2.3 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 7/93 (7%) Frame = -1 Query: 573 EPFVLSSFRYCLSSVDMILKYTL-LFSN----TGVNFQE--TFLLVLSLESPNAILLWFC 415 +P S+ C +I Y + L SN TGV F E + L L S +++ +++ Sbjct: 485 KPVDTLSYLVCFGCPPVISSYNIHLGSNEEQTTGVQFDEFAVYCKPLELASVDSMYIFYK 544 Query: 414 WSINLRA*WSLLFMSLTVCSVKITLNWMGK*DL 316 ++ LRA ++LLF T +L + G DL Sbjct: 545 GALGLRANYTLLFPDKTWSYYWTSLEYSGLLDL 577 >SB_48608| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 321 Score = 29.1 bits (62), Expect = 3.0 Identities = 15/45 (33%), Positives = 29/45 (64%) Frame = -1 Query: 591 MIRSSLEPFVLSSFRYCLSSVDMILKYTLLFSNTGVNFQETFLLV 457 MI + EP +L+ +Y ++S+ +K+T +S T +NF +T++ V Sbjct: 106 MIWTHDEPSLLNFLQY-INSIHPTIKFTHEYSPTRINFLDTYIHV 149 >SB_40674| Best HMM Match : Extensin_2 (HMM E-Value=0.19) Length = 291 Score = 29.1 bits (62), Expect = 3.0 Identities = 13/36 (36%), Positives = 16/36 (44%) Frame = +3 Query: 441 VTPKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548 ++P TK PP + T Y R CPP T T Sbjct: 1 MSPLTKRTYYRKKRYPPLTRCTNYRKRRCPPLTRCT 36 Score = 28.7 bits (61), Expect = 4.0 Identities = 13/34 (38%), Positives = 14/34 (41%) Frame = +3 Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKTNST 548 P TK PP + T Y R CPP T T Sbjct: 226 PLTKCTNYRKRRCPPLTRCTNYLKRRCPPLTKCT 259 Score = 28.3 bits (60), Expect = 5.2 Identities = 11/21 (52%), Positives = 11/21 (52%) Frame = +3 Query: 486 PPCWKTTEYTSRSCPPKTNST 548 PP K T Y R CPP T T Sbjct: 225 PPLTKCTNYRKRRCPPLTRCT 245 Score = 28.3 bits (60), Expect = 5.2 Identities = 11/21 (52%), Positives = 11/21 (52%) Frame = +3 Query: 486 PPCWKTTEYTSRSCPPKTNST 548 PP K T Y R CPP T T Sbjct: 253 PPLTKCTNYLKRRCPPLTKCT 273 Score = 27.9 bits (59), Expect = 6.9 Identities = 13/31 (41%), Positives = 13/31 (41%) Frame = +3 Query: 447 PKTKPARKSPGSLPPCWKTTEYTSRSCPPKT 539 P TK PP K T Y R CPP T Sbjct: 254 PLTKCTNYLKRRCPPLTKCTNYRKRRCPPLT 284 >SB_31262| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 358 Score = 29.1 bits (62), Expect = 3.0 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +3 Query: 438 SVTPKTKPARKSPGSLPPCWKTTEYTSRSCP 530 S++P + R S GSL P +T+ TSRS P Sbjct: 179 SISPASPALRSSLGSLAPTSRTSTPTSRSTP 209 >SB_9731| Best HMM Match : Lig_chan (HMM E-Value=3.7e-05) Length = 435 Score = 29.1 bits (62), Expect = 3.0 Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 1/81 (1%) Frame = +2 Query: 374 INKRDHHALKLIDQQNHNKIAFGDSKDKTSKKVSWKFTPVLENNRVYFKIMST-EDKQYL 550 +NK +H + D + IA+G + + ++ + PV E Y + T ED Sbjct: 22 VNKYEHPIKSIEDLADQQGIAYGTAPGQLAEMLKTASLPVYEKLWRYIETHGTLEDNATY 81 Query: 551 KLDNTKGSSDDRIIYGDSTAD 613 +D + D I+ + D Sbjct: 82 AIDKVRSRDDYAFIWDSAVLD 102 >SB_49054| Best HMM Match : Chordopox_A30L (HMM E-Value=4.1) Length = 432 Score = 28.7 bits (61), Expect = 4.0 Identities = 27/117 (23%), Positives = 51/117 (43%) Frame = +1 Query: 202 GKEGRGYQGSREASDRKRQEEHHGLRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAHKQ 381 G+ R G RE SDR+++ E R D+G G+R+ R D AH Sbjct: 151 GESSRIRSGDREKSDREKEREKERRRRRHEDEG-SGDRR----------RERRDKDAHDP 199 Query: 382 KGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSILQDHVHRRQTVPE 552 + P R + D K ++ ++ ++S L+ R+ +++ L + + + + E Sbjct: 200 EDPKRREKDDKKKSRERSKG--DEEHTKDSKLDEEDRIRRREKELLETLKQEEEAVE 254 >SB_52408| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 673 Score = 28.3 bits (60), Expect = 5.2 Identities = 14/63 (22%), Positives = 28/63 (44%) Frame = +1 Query: 346 DLHRADCQAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSILQDH 525 DLH + Q +Q G + + + QQ ++ Q+Q QQ+ L + + + L Sbjct: 558 DLHEEEVQHQQQFGLQEQSLGQEQRKQQQQLQQQQQQKQQQQLQKKQQKQSSMEEKLSSE 617 Query: 526 VHR 534 + + Sbjct: 618 IEK 620 >SB_33920| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1278 Score = 28.3 bits (60), Expect = 5.2 Identities = 19/45 (42%), Positives = 22/45 (48%) Frame = +1 Query: 424 QQNCIR*LQRQNQQESLLEVYPRVGKQQSILQDHVHRRQTVPEAR 558 QQ C LQR +S LE YP GK L +H RQ V + R Sbjct: 925 QQMCASDLQRLPYCQSQLEKYPGQGKLVPCLLEH---RQNVTDTR 966 >SB_27872| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 975 Score = 28.3 bits (60), Expect = 5.2 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +2 Query: 194 YLKEKKGEVIKEAVKRLIENGKRNTMDFAY 283 + +E+ GE EA KRLI+ GK+ M Y Sbjct: 676 FREEEDGESFAEAKKRLIKQGKQQIMFLLY 705 >SB_10252| Best HMM Match : tRNA-synt_2b (HMM E-Value=3.2e-32) Length = 734 Score = 28.3 bits (60), Expect = 5.2 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = +2 Query: 482 FTPVLENNRVYFKIMSTEDKQYLKLDNTKGSSDDRIIYGD 601 FT + E K MS E+KQ K DN KG S+ + GD Sbjct: 204 FTEMEEKIDEKVKEMSLEEKQPQKKDNQKGKSEKKKGKGD 243 >SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3934 Score = 28.3 bits (60), Expect = 5.2 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Frame = +2 Query: 383 RDHHALKLIDQQNHNK-IAFGDSKDKTSKKVSWKFTPVLENNRVYFKIMSTEDKQYLKLD 559 R HH+ + + K + SKD T+ VS + + E ++ M+T +K +K+ Sbjct: 418 RRHHSFGGLPLEYREKRLRESSSKDNTNTSVSLEIKKIREAQKLIDAAMATSEKS-IKVG 476 Query: 560 NTKGSSDDR 586 +KG D + Sbjct: 477 ESKGLWDSK 485 >SB_20304| Best HMM Match : Vicilin_N (HMM E-Value=4.6) Length = 261 Score = 27.9 bits (59), Expect = 6.9 Identities = 12/33 (36%), Positives = 15/33 (45%) Frame = +3 Query: 444 TPKTKPARKSPGSLPPCWKTTEYTSRSCPPKTN 542 +PKT P WKT+ T R PKT+ Sbjct: 41 SPKTSPKTSPKTGRKTSWKTSTKTGRKTSPKTS 73 >SB_12810| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 546 Score = 27.9 bits (59), Expect = 6.9 Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 3/74 (4%) Frame = +2 Query: 164 YETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQ---LWTKDGKEIVKSYFPI 334 Y + KC Y+ + +G ++ + + KR M + LWT ++I K Y Sbjct: 456 YPAGLTKCLSYVADDRGRALRLVLTKT--EAKRIPMLNRPEEGFLWTSTQQQITKGYESA 513 Query: 335 QFRVIFTEQTVKLI 376 R+ + T +++ Sbjct: 514 HIRLARNDSTTRIV 527 >SB_45611| Best HMM Match : p450 (HMM E-Value=0) Length = 847 Score = 27.5 bits (58), Expect = 9.1 Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 1/100 (1%) Frame = +2 Query: 158 GEYETAIAKCSEYLKEKKGEVIKE-AVKRLIENGKRNTMDFAYQLWTKDGKEIVKSYFPI 334 G ++ A +K+K +VI A+K + ++F + WT ++ P+ Sbjct: 402 GTFKKAKRVIKHAVKDKSSDVIDRWAIKEALA---LQPVEFGGRPWTVSFDLALRGERPL 458 Query: 335 QFRVIFTEQTVKLINKRDHHALKLIDQQNHNKIAFGDSKD 454 F + VKL K H ALK+ Q+ + ++ ++++ Sbjct: 459 VFEDY--GRHVKLHRKMGHRALKVYSQKKYQQVIIQEAEE 496 >SB_27646| Best HMM Match : CbiK (HMM E-Value=2.2) Length = 423 Score = 27.5 bits (58), Expect = 9.1 Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 9/134 (6%) Frame = +2 Query: 197 LKEKKGEVIKEAVKRLIENGKRNTMDF--AYQLWTKD---GKEIVKSYFPIQFRVI-FTE 358 LKEK E IKE+ K + + + + MDF + L + GK + + Q RV+ F + Sbjct: 233 LKEKFEEGIKESKKEIEDADQYDKMDFPLSDNLPVPEVAYGKHLKRKVLDRQGRVVSFFD 292 Query: 359 QTVKLINKRDHHALKLIDQQNHNKIA---FGDSKDKTSKKVSWKFTPVLENNRVYFKIMS 529 L K D AL+L ++ A + +SKD VSW + + + +I Sbjct: 293 ---GLFTKGDLDALRLYLLHYNSAYAYQGYDESKDTEHDNVSW-IAGIKVSKFIKSRIWK 348 Query: 530 TEDKQYLKLDNTKG 571 T + + N KG Sbjct: 349 TINSAVEYISNEKG 362 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,817,267 Number of Sequences: 59808 Number of extensions: 439860 Number of successful extensions: 1607 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1436 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1606 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1512078125 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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