Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g04r
         (481 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC...   224   6e-59
AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA...   224   6e-59
AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB...   210   7e-55
AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p pro...    31   0.62 
AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-P...    31   0.62 
AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-P...    31   0.62 

>AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC,
           isoform C protein.
          Length = 155

 Score =  224 bits (547), Expect = 6e-59
 Identities = 109/139 (78%), Positives = 121/139 (87%)
 Frame = -2

Query: 453 MADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPF 274
           MADQ ER+FQKQ  V LNRK   G+ + +K LR  +DVGLGFKTPREAI+GTYIDKKCP+
Sbjct: 1   MADQNERAFQKQFGVNLNRKVKPGITK-KKLLRRSRDVGLGFKTPREAIDGTYIDKKCPW 59

Query: 273 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEI 94
           TG+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE 
Sbjct: 60  TGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEH 119

Query: 93  GDIVTIGECRPLSKTVRFN 37
           GDIVTIGECRPLSKTVRFN
Sbjct: 120 GDIVTIGECRPLSKTVRFN 138


>AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA,
           isoform A protein.
          Length = 155

 Score =  224 bits (547), Expect = 6e-59
 Identities = 109/139 (78%), Positives = 121/139 (87%)
 Frame = -2

Query: 453 MADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPF 274
           MADQ ER+FQKQ  V LNRK   G+ + +K LR  +DVGLGFKTPREAI+GTYIDKKCP+
Sbjct: 1   MADQNERAFQKQFGVNLNRKVKPGITK-KKLLRRSRDVGLGFKTPREAIDGTYIDKKCPW 59

Query: 273 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEI 94
           TG+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE 
Sbjct: 60  TGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEH 119

Query: 93  GDIVTIGECRPLSKTVRFN 37
           GDIVTIGECRPLSKTVRFN
Sbjct: 120 GDIVTIGECRPLSKTVRFN 138


>AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB,
           isoform B protein.
          Length = 154

 Score =  210 bits (513), Expect = 7e-55
 Identities = 102/140 (72%), Positives = 120/140 (85%), Gaps = 1/140 (0%)
 Frame = -2

Query: 453 MADQ-TERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCP 277
           MADQ TERSF+KQ  V + R+K   +K+  +P R+++ +GLGF+ P EAI+GTYIDKKCP
Sbjct: 1   MADQQTERSFRKQHAVVVVRRKSPNLKK--RP-RFYRQIGLGFRAPAEAIDGTYIDKKCP 57

Query: 276 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 97
           +TG+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE
Sbjct: 58  WTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVE 117

Query: 96  IGDIVTIGECRPLSKTVRFN 37
            GDIVTIGECRPLSKTVRFN
Sbjct: 118 HGDIVTIGECRPLSKTVRFN 137


>AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p
           protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -2

Query: 261 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 121
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


>AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-PB,
           isoform B protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -2

Query: 261 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 121
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


>AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-PA,
           isoform A protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -2

Query: 261 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 121
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,409,800
Number of Sequences: 53049
Number of extensions: 437609
Number of successful extensions: 1216
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)