Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10g04f
(516 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for ... 250 3e-66
BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein. 250 3e-66
BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11 p... 250 3e-66
BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11 p... 250 3e-66
BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11 p... 250 3e-66
BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein. 250 3e-66
BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11 p... 250 3e-66
BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11 p... 250 3e-66
AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11 p... 250 3e-66
AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11 p... 142 7e-34
BC017710-1|AAH17710.1| 423|Homo sapiens zinc finger protein 271... 33 0.45
AF159567-1|AAD43569.1| 423|Homo sapiens epstein-barr virus-indu... 33 0.45
AF153201-1|AAD38056.1| 423|Homo sapiens zinc finger protein dp ... 33 0.45
Z95636-1|CAB09137.1| 953|Homo sapiens laminin alpha 5 chain pro... 30 4.2
BC003355-1|AAH03355.1| 670|Homo sapiens LAMA5 protein protein. 30 4.2
AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein. 30 4.2
AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain pr... 30 4.2
AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein. 30 4.2
BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein. 29 7.3
AK160365-1|BAD18708.1| 1651|Homo sapiens FLJ00261 protein protein. 29 9.7
>X06617-1|CAA29834.1| 158|Homo sapiens protein ( Human mRNA for
ribosomal protein S11. ).
Length = 158
Score = 250 bits (611), Expect = 3e-66
Identities = 117/145 (80%), Positives = 132/145 (91%), Gaps = 2/145 (1%)
Frame = +2
Query: 29 MAD-QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKC 202
MAD QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 203 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 382
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 383 EIGDIVTIGECRPLSKTVRFNVLKV 457
+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKV 145
>BC100025-1|AAI00026.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 250 bits (611), Expect = 3e-66
Identities = 117/145 (80%), Positives = 132/145 (91%), Gaps = 2/145 (1%)
Frame = +2
Query: 29 MAD-QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKC 202
MAD QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 203 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 382
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 383 EIGDIVTIGECRPLSKTVRFNVLKV 457
+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKV 145
>BC070224-1|AAH70224.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 250 bits (611), Expect = 3e-66
Identities = 117/145 (80%), Positives = 132/145 (91%), Gaps = 2/145 (1%)
Frame = +2
Query: 29 MAD-QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKC 202
MAD QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 203 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 382
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 383 EIGDIVTIGECRPLSKTVRFNVLKV 457
+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKV 145
>BC016378-1|AAH16378.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 250 bits (611), Expect = 3e-66
Identities = 117/145 (80%), Positives = 132/145 (91%), Gaps = 2/145 (1%)
Frame = +2
Query: 29 MAD-QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKC 202
MAD QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 203 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 382
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 383 EIGDIVTIGECRPLSKTVRFNVLKV 457
+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKV 145
>BC010028-1|AAH10028.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 250 bits (611), Expect = 3e-66
Identities = 117/145 (80%), Positives = 132/145 (91%), Gaps = 2/145 (1%)
Frame = +2
Query: 29 MAD-QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKC 202
MAD QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 203 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 382
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 383 EIGDIVTIGECRPLSKTVRFNVLKV 457
+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKV 145
>BC007945-1|AAH07945.1| 158|Homo sapiens RPS11 protein protein.
Length = 158
Score = 250 bits (611), Expect = 3e-66
Identities = 117/145 (80%), Positives = 132/145 (91%), Gaps = 2/145 (1%)
Frame = +2
Query: 29 MAD-QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKC 202
MAD QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 203 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 382
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 383 EIGDIVTIGECRPLSKTVRFNVLKV 457
+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKV 145
>BC007603-1|AAH07603.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 250 bits (611), Expect = 3e-66
Identities = 117/145 (80%), Positives = 132/145 (91%), Gaps = 2/145 (1%)
Frame = +2
Query: 29 MAD-QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKC 202
MAD QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 203 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 382
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 383 EIGDIVTIGECRPLSKTVRFNVLKV 457
+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKV 145
>BC007283-1|AAH07283.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 250 bits (611), Expect = 3e-66
Identities = 117/145 (80%), Positives = 132/145 (91%), Gaps = 2/145 (1%)
Frame = +2
Query: 29 MAD-QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKC 202
MAD QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 203 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 382
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 383 EIGDIVTIGECRPLSKTVRFNVLKV 457
+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKV 145
>AB028893-2|BAA88215.1| 158|Homo sapiens ribosomal protein S11
protein.
Length = 158
Score = 250 bits (611), Expect = 3e-66
Identities = 117/145 (80%), Positives = 132/145 (91%), Gaps = 2/145 (1%)
Frame = +2
Query: 29 MAD-QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKC 202
MAD QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 203 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 382
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 383 EIGDIVTIGECRPLSKTVRFNVLKV 457
+IGDIVT+GECRPLSKTVRFNVLKV
Sbjct: 121 QIGDIVTVGECRPLSKTVRFNVLKV 145
>AB007152-1|BAA25818.1| 83|Homo sapiens ribosomal protein S11
protein.
Length = 83
Score = 142 bits (344), Expect = 7e-34
Identities = 64/70 (91%), Positives = 68/70 (97%)
Frame = +2
Query: 248 VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLS 427
VV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLS
Sbjct: 1 VVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLS 60
Query: 428 KTVRFNVLKV 457
KTVRFNVLKV
Sbjct: 61 KTVRFNVLKV 70
>BC017710-1|AAH17710.1| 423|Homo sapiens zinc finger protein 271
protein.
Length = 423
Score = 33.5 bits (73), Expect = 0.45
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 228 RIETL-PVKGHFLSM*VPSIASRGVLKPRPTSLWYLNGFLLRFTPIPFLRFRK 73
RI+TL ++G L ++ S G L R SL+Y+ GF+L PIP + K
Sbjct: 37 RIQTLLNIEGSTLERNPINVMSVGKLLIRAQSLFYIRGFILERNPIPVINVAK 89
>AF159567-1|AAD43569.1| 423|Homo sapiens epstein-barr virus-induced
zinc finger protein protein.
Length = 423
Score = 33.5 bits (73), Expect = 0.45
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 228 RIETL-PVKGHFLSM*VPSIASRGVLKPRPTSLWYLNGFLLRFTPIPFLRFRK 73
RI+TL ++G L ++ S G L R SL+Y+ GF+L PIP + K
Sbjct: 37 RIQTLLNIEGSTLERNPINVMSVGKLLIRAQSLFYIRGFILERNPIPVINVAK 89
>AF153201-1|AAD38056.1| 423|Homo sapiens zinc finger protein dp
protein.
Length = 423
Score = 33.5 bits (73), Expect = 0.45
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 228 RIETL-PVKGHFLSM*VPSIASRGVLKPRPTSLWYLNGFLLRFTPIPFLRFRK 73
RI+TL ++G L ++ S G L R SL+Y+ GF+L PIP + K
Sbjct: 37 RIQTLLNIEGSTLERNPINVMSVGKLLIRAQSLFYIRGFILERNPIPVINVAK 89
>Z95636-1|CAB09137.1| 953|Homo sapiens laminin alpha 5 chain
protein.
Length = 953
Score = 30.3 bits (65), Expect = 4.2
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 168 SRGVLKPRPTS-LWYLNGFLLRFTPIPFLRFRKTVGC 61
+ G+L RP ++Y+ G+ FTP P LRF GC
Sbjct: 121 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 157
>BC003355-1|AAH03355.1| 670|Homo sapiens LAMA5 protein protein.
Length = 670
Score = 30.3 bits (65), Expect = 4.2
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 168 SRGVLKPRPTS-LWYLNGFLLRFTPIPFLRFRKTVGC 61
+ G+L RP ++Y+ G+ FTP P LRF GC
Sbjct: 69 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 105
>AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein.
Length = 3690
Score = 30.3 bits (65), Expect = 4.2
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 168 SRGVLKPRPTS-LWYLNGFLLRFTPIPFLRFRKTVGC 61
+ G+L RP ++Y+ G+ FTP P LRF GC
Sbjct: 2863 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 2899
>AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain
precursor protein.
Length = 3695
Score = 30.3 bits (65), Expect = 4.2
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 168 SRGVLKPRPTS-LWYLNGFLLRFTPIPFLRFRKTVGC 61
+ G+L RP ++Y+ G+ FTP P LRF GC
Sbjct: 2863 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 2899
>AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein.
Length = 1645
Score = 30.3 bits (65), Expect = 4.2
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 168 SRGVLKPRPTS-LWYLNGFLLRFTPIPFLRFRKTVGC 61
+ G+L RP ++Y+ G+ FTP P LRF GC
Sbjct: 813 AEGLLNLRPDDFVFYVGGYPSTFTPPPLLRFPGYRGC 849
>BC008931-1|AAH08931.2| 429|Homo sapiens SETMAR protein protein.
Length = 429
Score = 29.5 bits (63), Expect = 7.3
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -2
Query: 188 CRYPQSPHGES*NRGPHPCGISTVFCSASHQYLSCGSERL*VVFGMSVPSDPPFC--LTM 15
CR+ + P RGP S+++C +SCG+E+ + G S PS P C LT+
Sbjct: 32 CRWARGP------RGPRRRPSSSLYCPVEKSNISCGNEKEPSMCG-SAPSVFPSCKRLTL 84
Query: 14 KRKK 3
+ K
Sbjct: 85 ETMK 88
>AK160365-1|BAD18708.1| 1651|Homo sapiens FLJ00261 protein protein.
Length = 1651
Score = 29.1 bits (62), Expect = 9.7
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 206 RDTSCQCRYPQSPHGES*NRGPHPCGISTVFCSASHQYLSCGS 78
R+TSC R P++ P PCG S + +A + + S G+
Sbjct: 598 RETSCAARAPETASAPLSMDDPSPCGTSEMCQAALYGFPSTGT 640
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,324,963
Number of Sequences: 237096
Number of extensions: 1438234
Number of successful extensions: 2714
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2705
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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