Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10g04f
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC...   231   6e-61
AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA...   231   6e-61
AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB...   217   7e-57
AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p pro...    31   0.70 
AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-P...    31   0.70 
AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-P...    31   0.70 

>AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC,
           isoform C protein.
          Length = 155

 Score =  231 bits (564), Expect = 6e-61
 Identities = 113/143 (79%), Positives = 125/143 (87%)
 Frame = +2

Query: 29  MADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPF 208
           MADQ ER+FQKQ  V LNRK   G+ + +K LR  +DVGLGFKTPREAI+GTYIDKKCP+
Sbjct: 1   MADQNERAFQKQFGVNLNRKVKPGITK-KKLLRRSRDVGLGFKTPREAIDGTYIDKKCPW 59

Query: 209 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEI 388
           TG+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE 
Sbjct: 60  TGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEH 119

Query: 389 GDIVTIGECRPLSKTVRFNVLKV 457
           GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 120 GDIVTIGECRPLSKTVRFNVLKV 142


>AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA,
           isoform A protein.
          Length = 155

 Score =  231 bits (564), Expect = 6e-61
 Identities = 113/143 (79%), Positives = 125/143 (87%)
 Frame = +2

Query: 29  MADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPF 208
           MADQ ER+FQKQ  V LNRK   G+ + +K LR  +DVGLGFKTPREAI+GTYIDKKCP+
Sbjct: 1   MADQNERAFQKQFGVNLNRKVKPGITK-KKLLRRSRDVGLGFKTPREAIDGTYIDKKCPW 59

Query: 209 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEI 388
           TG+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE 
Sbjct: 60  TGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEH 119

Query: 389 GDIVTIGECRPLSKTVRFNVLKV 457
           GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 120 GDIVTIGECRPLSKTVRFNVLKV 142


>AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB,
           isoform B protein.
          Length = 154

 Score =  217 bits (530), Expect = 7e-57
 Identities = 106/144 (73%), Positives = 124/144 (86%), Gaps = 1/144 (0%)
 Frame = +2

Query: 29  MADQ-TERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCP 205
           MADQ TERSF+KQ  V + R+K   +K+  +P R+++ +GLGF+ P EAI+GTYIDKKCP
Sbjct: 1   MADQQTERSFRKQHAVVVVRRKSPNLKK--RP-RFYRQIGLGFRAPAEAIDGTYIDKKCP 57

Query: 206 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 385
           +TG+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE
Sbjct: 58  WTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVE 117

Query: 386 IGDIVTIGECRPLSKTVRFNVLKV 457
            GDIVTIGECRPLSKTVRFNVLKV
Sbjct: 118 HGDIVTIGECRPLSKTVRFNVLKV 141


>AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p
           protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +2

Query: 221 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 361
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


>AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-PB,
           isoform B protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +2

Query: 221 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 361
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


>AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-PA,
           isoform A protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +2

Query: 221 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 361
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,332,907
Number of Sequences: 53049
Number of extensions: 456821
Number of successful extensions: 1258
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)