Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10f23r
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 33 0.16
Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 29 4.5
U29244-5|AAC71090.1| 378|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL034488-4|CAA22449.1| 497|Caenorhabditis elegans Hypothetical ... 29 4.5
U46675-6|AAB52642.1| 111|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z80214-5|CAJ76929.1| 916|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z80214-4|CAB02263.1| 982|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z46343-4|CAA86460.1| 336|Caenorhabditis elegans Hypothetical pr... 28 7.9
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = -2
Query: 695 NCTTASSPVTTTALSVRAWNTRTKARAPXXXXXXXXXXXXRVGTPWSTATSCGSATDSTL 516
NC + TT S + T T A + T ST S ++TDST
Sbjct: 171 NCNVLTDIPVTTTTSTTSSTTTTTATSTTESTSTSTDSTTTESTTESTTESTSTSTDSTT 230
Query: 515 SESTSPITLDSS 480
+EST+ T +S+
Sbjct: 231 TESTTESTTEST 242
Score = 31.9 bits (69), Expect = 0.49
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = -2
Query: 704 SRRNCTTASSPVTTTALSVRAWNTRTKARAPXXXXXXXXXXXXRVGTPWSTATSCGSATD 525
S TTA+S +T+ S + T + + T ST S ++TD
Sbjct: 188 SSTTTTTATSTTESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTTESTTESTSTSTD 247
Query: 524 STLSESTSPIT 492
ST +ESTS T
Sbjct: 248 STTTESTSTST 258
>Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical
protein F53C11.7 protein.
Length = 478
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = -1
Query: 408 PANERLAYGDGKEKNSDLI--SWKFITLW----ENNRVYFKIHNTKYN-QYLKLSSTTDC 250
PA + + D K DL+ S ++ LW +NN + NT +Y ++ D
Sbjct: 204 PATKIMWIPDQKGTFPDLLATSGDYLRLWRIGTDNNACIESLLNTNRTAEYCAPLTSFDW 263
Query: 249 NTQDRVIFGTNTADTTREQWFLQ 181
N D + GT++ DTT W L+
Sbjct: 264 NELDMNLIGTSSIDTTCTVWQLE 286
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = -2
Query: 713 TKNSRRNCTTASSPVTTTALSVRAWNTRTKARAPXXXXXXXXXXXXRVGTPWSTATSCGS 534
T +S + +T +S VTTT ++ T T P TP +T+T+ +
Sbjct: 276 TTSSTTSTSTTTSVVTTTTVTSTTEPT-TSTSTPTTTTTMQTTTPSTTSTPTTTSTTTTT 334
Query: 533 ATDSTLSESTSPIT 492
+ +T +T P T
Sbjct: 335 SASTTTISTTKPPT 348
>U29244-5|AAC71090.1| 378|Caenorhabditis elegans Hypothetical
protein ZK1248.9 protein.
Length = 378
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = -1
Query: 372 EKNSDLISWKFITLWENNRVYFKIHNTKYNQYLKLSSTTDCNTQDRVIFGTNTADTTREQ 193
EKN D K + N + + +T Y + L S DCN +F N ADT ++
Sbjct: 115 EKNPDFFKMK-----DGNHIVYDGQSTLYTT-INLFSELDCNQTKSKVFQINGADTGNDE 168
>AL034488-4|CAA22449.1| 497|Caenorhabditis elegans Hypothetical
protein Y54G11A.4 protein.
Length = 497
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 228 FGTNTADTTREQWFLQPTKYENDVLFFIYNREYNDALKL 112
F T D R+ W L Y + LF I + EY AL++
Sbjct: 236 FMYKTEDDWRQGWMLAAHNYWHTALFHIESAEYEPALEI 274
>U46675-6|AAB52642.1| 111|Caenorhabditis elegans Hypothetical
protein F35A5.2 protein.
Length = 111
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 174 KYENDVLFFIYNREYND 124
KY N F YNREYND
Sbjct: 29 KYNNPPFCFAYNREYND 45
>Z80214-5|CAJ76929.1| 916|Caenorhabditis elegans Hypothetical
protein C27D8.3b protein.
Length = 916
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 226 RHQHRRHHQGAVVPPAHEVRKRRPVLHLQSRVQRCFE 116
+H H+ HH +++PP R P L S R FE
Sbjct: 854 QHHHQSHHHPSLIPPT-TTSIRSPTLGPPSSQDRSFE 889
>Z80214-4|CAB02263.1| 982|Caenorhabditis elegans Hypothetical protein
C27D8.3a protein.
Length = 982
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 226 RHQHRRHHQGAVVPPAHEVRKRRPVLHLQSRVQRCFE 116
+H H+ HH +++PP R P L S R FE
Sbjct: 920 QHHHQSHHHPSLIPPT-TTSIRSPTLGPPSSQDRSFE 955
>Z46343-4|CAA86460.1| 336|Caenorhabditis elegans Hypothetical
protein T23F11.5 protein.
Length = 336
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 218 LVPNITRS*VLQSVVELSFKYWLYLVLWILKYTLLFSHKVMNFQLMRSLFFSLPSPYASL 397
L NI+ + + S+ L L+ +I++ TLL + ++NF ++R FS + +
Sbjct: 7 LSSNISYDDPISFECDTSYDSGLELLKYIIQVTLLSINFILNFLIIRVTMFSKNNDFREN 66
Query: 398 SF 403
SF
Sbjct: 67 SF 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,972,240
Number of Sequences: 27780
Number of extensions: 338380
Number of successful extensions: 1119
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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