Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10f23f
         (608 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2265|AAF53230.1|  255|Drosophila melanogaster CG16800-P...    33   0.30 
X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II transm...    30   2.8  
AY129446-1|AAM76188.1| 1009|Drosophila melanogaster LD20608p pro...    30   2.8  
AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-P...    30   2.8  
AY061123-1|AAL28671.1|  611|Drosophila melanogaster LD10456p pro...    29   5.0  
AE014134-3589|AAF57260.3|  611|Drosophila melanogaster CG3278-PA...    29   5.0  
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA...    29   6.6  
AE014296-517|AAF47693.2|  753|Drosophila melanogaster CG9973-PA ...    28   8.7  

>AE014134-2265|AAF53230.1|  255|Drosophila melanogaster CG16800-PA
           protein.
          Length = 255

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -1

Query: 113 RGHFSDAGADGEHARREHHEKFHYHS 36
           +GH    G  GEH   E HEK H HS
Sbjct: 78  KGHHDKEGKKGEHGEEEGHEKKHKHS 103


>X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II
            transmembrane protein protein.
          Length = 3004

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
 Frame = +3

Query: 195  RQSLEYENQGKGSIIQNVVNNLIIDKSRNTMEYCYKLWVGNGQHI-VRKYFPYNFRLIMA 371
            R    Y   G+ S  +    N+ ++   N   Y    W  +GQ + V    P+ FR    
Sbjct: 2340 RMEFSYGVHGRISQTRTYTRNMAVNSYTNVKNYT---WDCDGQLVGVEAQEPWGFRYDDN 2396

Query: 372  GNFVKLIYRNYNLALKLGPTLDPANERLA-YGDGKEK 479
            GN + L YR   + ++       A +R+  +G+G+ K
Sbjct: 2397 GNLLSLTYRGNTIPMEYN-----AQDRIVKFGEGQYK 2428


>AY129446-1|AAM76188.1| 1009|Drosophila melanogaster LD20608p
           protein.
          Length = 1009

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
 Frame = +3

Query: 195 RQSLEYENQGKGSIIQNVVNNLIIDKSRNTMEYCYKLWVGNGQHI-VRKYFPYNFRLIMA 371
           R    Y   G+ S  +    N+ ++   N   Y    W  +GQ + V    P+ FR    
Sbjct: 345 RMEFSYGVHGRISQTRTYTRNMAVNSYTNVKNYT---WDCDGQLVGVEAQEPWGFRYDDN 401

Query: 372 GNFVKLIYRNYNLALKLGPTLDPANERLA-YGDGKEK 479
           GN + L YR   + ++       A +R+  +G+G+ K
Sbjct: 402 GNLLSLTYRGNTIPMEYN-----AQDRIVKFGEGQYK 433


>AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-PA
            protein.
          Length = 3004

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
 Frame = +3

Query: 195  RQSLEYENQGKGSIIQNVVNNLIIDKSRNTMEYCYKLWVGNGQHI-VRKYFPYNFRLIMA 371
            R    Y   G+ S  +    N+ ++   N   Y    W  +GQ + V    P+ FR    
Sbjct: 2340 RMEFSYGVHGRISQTRTYTRNMAVNSYTNVKNYT---WDCDGQLVGVEAQEPWGFRYDDN 2396

Query: 372  GNFVKLIYRNYNLALKLGPTLDPANERLA-YGDGKEK 479
            GN + L YR   + ++       A +R+  +G+G+ K
Sbjct: 2397 GNLLSLTYRGNTIPMEYN-----AQDRIVKFGEGQYK 2428


>AY061123-1|AAL28671.1|  611|Drosophila melanogaster LD10456p
           protein.
          Length = 611

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 565 WLYLVLWILKYTLLFSHKVMNFQLMRSLFFSLPSP 461
           +LY VLW+L+Y  +F   V    L + L   + +P
Sbjct: 208 YLYNVLWLLEYKPIFEELVFQLVLQKLLLLDVNAP 242


>AE014134-3589|AAF57260.3|  611|Drosophila melanogaster CG3278-PA,
           isoform A protein.
          Length = 611

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -2

Query: 565 WLYLVLWILKYTLLFSHKVMNFQLMRSLFFSLPSP 461
           +LY VLW+L+Y  +F   V    L + L   + +P
Sbjct: 208 YLYNVLWLLEYKPIFEELVFQLVLQKLLLLDVNAP 242


>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
           protein.
          Length = 2284

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 351 YRGSTF*QCAVRCRPTACSSTPWCS 277
           Y GST  +C  R RPT  +S P CS
Sbjct: 499 YPGSTDPECQPRTRPTITTSQPRCS 523


>AE014296-517|AAF47693.2|  753|Drosophila melanogaster CG9973-PA
           protein.
          Length = 753

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 14/58 (24%), Positives = 25/58 (43%)
 Frame = +2

Query: 164 HPHR*LRQRCPSELGIREPRQGLHHPECS*QPDH*QESEHHGVLLQAVGRQRTAHCQK 337
           HPH   +Q  P +  +++ +Q  HH +   Q    Q+ +          RQ+  H Q+
Sbjct: 64  HPHHHYQQHYPQQQHLQQQQQQQHHAQQQHQQQQQQQQQQQQQHWDYYARQQQQHQQQ 121


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,108,219
Number of Sequences: 53049
Number of extensions: 526632
Number of successful extensions: 2453
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2427
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)