Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10f22f
         (617 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030122-1|ABN49261.1|  540|Drosophila melanogaster IP13510p pro...    29   6.6  
AE014134-2225|AAF53207.2|  634|Drosophila melanogaster CG15485-P...    29   6.6  

>BT030122-1|ABN49261.1|  540|Drosophila melanogaster IP13510p
           protein.
          Length = 540

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = +3

Query: 468 KVSWKFIALWENNKVYFKILNTERNQYLVLGVGTN---PNGDHMAFGV 602
           K +W   A   N K  ++ L ++ N+++++GV TN    +GD++A  V
Sbjct: 395 KTNWWSSASLRNFKERYRCLESQYNKFILMGVQTNGSLTSGDNIADNV 442


>AE014134-2225|AAF53207.2|  634|Drosophila melanogaster CG15485-PA
           protein.
          Length = 634

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = +3

Query: 468 KVSWKFIALWENNKVYFKILNTERNQYLVLGVGTN---PNGDHMAFGV 602
           K +W   A   N K  ++ L ++ N+++++GV TN    +GD++A  V
Sbjct: 489 KTNWWSSASLRNFKERYRCLESQYNKFILMGVQTNGSLTSGDNIADNV 536


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,109,821
Number of Sequences: 53049
Number of extensions: 486814
Number of successful extensions: 1838
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1838
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)