Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10f21r
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    26   0.36 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.3  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   3.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.4  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 228 IIKIHCVLLNFMYSKELSPTSTKY 299
           +  + C+LL F Y+  +S T TKY
Sbjct: 4   VFVVCCLLLMFSYTDNVSSTRTKY 27


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 661 ITFFFVIGHGVISTYTKXF 717
           +TF  V+G GVIS  T  F
Sbjct: 77  VTFVIVLGSGVISKGTLLF 95


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 661 ITFFFVIGHGVISTYTKXF 717
           +TF  V+G GVIS  T  F
Sbjct: 77  VTFVIVLGSGVISKGTLLF 95


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 625 WGL*YVRY*KEAITFFFVIGHGVISTYTKXF 717
           WG+ +++       FF V+G  V+S  T  F
Sbjct: 55  WGVKFLKVVTIITVFFVVLGAAVVSKGTTLF 85


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 625 WGL*YVRY*KEAITFFFVIGHGVISTYTKXF 717
           WG+ +++       FF V+G  V+S  T  F
Sbjct: 55  WGVKFLKVVTIITVFFVVLGAAVVSKGTTLF 85


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 661 ITFFFVIGHGVISTYTKXF 717
           +TF  V+G GVIS  T  F
Sbjct: 77  VTFVIVLGSGVISKGTLLF 95


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 661 ITFFFVIGHGVISTYTKXF 717
           +TF  V+G GVIS  T  F
Sbjct: 77  VTFVIVLGSGVISKGTLLF 95


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +3

Query: 396 YSVTTSFYLKLQINLVSIL 452
           Y++ +S  LKL IN++S++
Sbjct: 185 YNIASSKTLKLSINIISLV 203


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 476  PGTKVNYPKW 505
            PG+  NYP+W
Sbjct: 1360 PGSTTNYPEW 1369


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,683
Number of Sequences: 336
Number of extensions: 3284
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)