Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10f21f
         (654 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q837W2 Cluster: Putative uncharacterized protein; n=2; ...    39   0.12 
UniRef50_Q9MJ72 Cluster: ORF10; n=1; Physarum polycephalum|Rep: ...    34   3.4  
UniRef50_A4L217 Cluster: Putative uncharacterized protein; n=1; ...    33   4.5  
UniRef50_UPI0000E87CBD Cluster: ribose-5-phosphate isomerase A; ...    33   6.0  

>UniRef50_Q837W2 Cluster: Putative uncharacterized protein; n=2;
           Enterococcus|Rep: Putative uncharacterized protein -
           Enterococcus faecalis (Streptococcus faecalis)
          Length = 220

 Score = 38.7 bits (86), Expect = 0.12
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -1

Query: 648 FYPNVIRDILSFVQPSLIYYFLWFCCFTRLFIGLYLHI 535
           F P+++   L  + P  I YF WF  F  +F+G  LH+
Sbjct: 52  FLPDLVNKFLKIIMPPTIVYFYWFFLFISVFLGTSLHM 89


>UniRef50_Q9MJ72 Cluster: ORF10; n=1; Physarum polycephalum|Rep:
           ORF10 - Physarum polycephalum (Slime mold)
          Length = 376

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 16/67 (23%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = -1

Query: 615 FVQPSLIYYFLWFCCFTRLFIGLYLHIY*D*L*YSRIGFYLYIIVLLVLSRHQVVFN--Y 442
           F+  +     L+F C  ++F  LY+H++     +   G YL+I++L ++  ++++    Y
Sbjct: 138 FIYQNTFMIHLFFKCSKKMFRLLYIHLH-----FDAFGKYLHILLLSIVIIYEIIHTNMY 192

Query: 441 YSFLLFF 421
           Y++ + F
Sbjct: 193 YTYYMLF 199


>UniRef50_A4L217 Cluster: Putative uncharacterized protein; n=1;
           Gryllus bimaculatus nudivirus|Rep: Putative
           uncharacterized protein - Gryllus bimaculatus nudivirus
          Length = 120

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 15/69 (21%), Positives = 36/69 (52%)
 Frame = -1

Query: 636 VIRDILSFVQPSLIYYFLWFCCFTRLFIGLYLHIY*D*L*YSRIGFYLYIIVLLVLSRHQ 457
           ++  +L+ +    IY +++   +  ++I +Y++IY     Y  I  Y+YI + + +  + 
Sbjct: 52  ILVSVLNAILYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYIYI 111

Query: 456 VVFNYYSFL 430
            ++ YY  L
Sbjct: 112 YIYIYYKIL 120


>UniRef50_UPI0000E87CBD Cluster: ribose-5-phosphate isomerase A;
           n=1; Methylophilales bacterium HTCC2181|Rep:
           ribose-5-phosphate isomerase A - Methylophilales
           bacterium HTCC2181
          Length = 224

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 155 SEANYIFGSKLKCRFSDNNLKKIGSEVKSVPSM 253
           S  NY+    L C F++ NLKK+G E+ S+P +
Sbjct: 170 SYGNYV----LDCEFNETNLKKLGDEIASIPGV 198


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,117,969
Number of Sequences: 1657284
Number of extensions: 11532485
Number of successful extensions: 27314
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27190
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)