Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10f19r
(768 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 457 e-129
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 457 e-129
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 457 e-129
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 456 e-129
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 456 e-129
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 439 e-124
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 355 1e-98
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 191 5e-49
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 189 2e-48
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 188 5e-48
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 188 5e-48
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 187 6e-48
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 187 6e-48
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 187 6e-48
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 187 8e-48
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 184 4e-47
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 105 3e-23
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 102 3e-22
At1g70140.1 68414.m08071 formin homology 2 domain-containing pro... 36 0.039
At5g33320.1 68418.m03955 triose phosphate/phosphate translocator... 33 0.28
At3g62210.1 68416.m06989 expressed protein contains Pfam profile... 33 0.28
At2g40070.1 68415.m04923 expressed protein 33 0.28
At3g08670.1 68416.m01007 expressed protein 31 0.64
At1g01190.1 68414.m00032 cytochrome P450, putative similar to cy... 31 0.85
At1g29200.1 68414.m03573 hypothetical protein contains Pfam PF03... 30 1.5
At3g51540.1 68416.m05644 expressed protein mucin 5AC, Homo sapie... 29 2.6
At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to ... 29 4.5
At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein ... 28 6.0
At2g15020.1 68415.m01710 expressed protein and genefinder 28 6.0
At1g68080.1 68414.m07777 expressed protein 28 6.0
At1g62870.1 68414.m07099 expressed protein 28 6.0
At3g26855.1 68416.m03360 hypothetical protein 28 7.9
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 457 bits (1126), Expect = e-129
Identities = 205/240 (85%), Positives = 224/240 (93%)
Frame = -1
Query: 765 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 586
D A ++DNEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTN
Sbjct: 199 DVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTN 258
Query: 585 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 406
LVPYPRIHF L +YAPVISA KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++
Sbjct: 259 LVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLM 318
Query: 405 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 226
YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+
Sbjct: 319 YRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMI 378
Query: 225 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 46
SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 379 SNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 457 bits (1126), Expect = e-129
Identities = 205/240 (85%), Positives = 224/240 (93%)
Frame = -1
Query: 765 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 586
D A ++DNEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTN
Sbjct: 199 DVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTN 258
Query: 585 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 406
LVPYPRIHF L +YAPVISA KAYHEQLSV EITNA FEPA+ M KCDPRHGKYMACC++
Sbjct: 259 LVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPASMMAKCDPRHGKYMACCLM 318
Query: 405 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 226
YRGDVVPKDVNAA+ TIKTKRT+QFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+
Sbjct: 319 YRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMI 378
Query: 225 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 46
SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 379 SNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 457 bits (1126), Expect = e-129
Identities = 203/240 (84%), Positives = 228/240 (95%)
Frame = -1
Query: 765 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 586
D + ++DNEAIYDICRR+L+IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTN
Sbjct: 199 DVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 258
Query: 585 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 406
LVPYPRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++
Sbjct: 259 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLM 318
Query: 405 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 226
YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+
Sbjct: 319 YRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMI 378
Query: 225 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 46
SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 379 SNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 456 bits (1125), Expect = e-129
Identities = 203/240 (84%), Positives = 227/240 (94%)
Frame = -1
Query: 765 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 586
D + ++DNEAIYDICRR+L IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTN
Sbjct: 199 DVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 258
Query: 585 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 406
LVPYPRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++
Sbjct: 259 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLM 318
Query: 405 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 226
YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+
Sbjct: 319 YRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMI 378
Query: 225 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 46
SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 379 SNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 456 bits (1125), Expect = e-129
Identities = 203/240 (84%), Positives = 227/240 (94%)
Frame = -1
Query: 765 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 586
D + ++DNEAIYDICRR+L IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTN
Sbjct: 199 DVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 258
Query: 585 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 406
LVPYPRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++
Sbjct: 259 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLM 318
Query: 405 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 226
YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+
Sbjct: 319 YRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMI 378
Query: 225 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 46
SN+T++AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 379 SNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 439 bits (1082), Expect = e-124
Identities = 195/238 (81%), Positives = 217/238 (91%)
Frame = -1
Query: 765 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 586
D ++DNEAIYDICRR+LDIERPTY+NLNRLI Q +SS+T SLRFDGA+NVD+TEFQTN
Sbjct: 199 DVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTN 258
Query: 585 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 406
LVPYPRIHF L +YAPVIS+ KAYHEQ SV EIT + FEP+N M KCDPRHGKYMACC++
Sbjct: 259 LVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSNMMAKCDPRHGKYMACCLM 318
Query: 405 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 226
YRGDVVPKDVN A+A IK KRTIQFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+
Sbjct: 319 YRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMI 378
Query: 225 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 52
SN TA+AE ++R+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG
Sbjct: 379 SNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG 436
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 355 bits (874), Expect = 1e-98
Identities = 157/188 (83%), Positives = 178/188 (94%)
Frame = -1
Query: 765 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 586
D + ++DNEAIYDICRR+L+IERPTYTNLNRL+ Q++SS+TASLRFDGALNVD+TEFQTN
Sbjct: 199 DVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTN 258
Query: 585 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 406
LVPYPRIHF L +YAPVISAEKA+HEQLSVAEITN+ FEPA+ M KCDPRHGKYMACC++
Sbjct: 259 LVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLM 318
Query: 405 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 226
YRGDVVPKDVNAA+ TIKTKRTIQFVDWCPTGFK GINYQPPTVVPGGDLAKVQRAVCM+
Sbjct: 319 YRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMI 378
Query: 225 SNTTAIAE 202
SN+T++AE
Sbjct: 379 SNSTSVAE 386
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 191 bits (465), Expect = 5e-49
Identities = 88/236 (37%), Positives = 140/236 (59%)
Frame = -1
Query: 765 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 586
D ++DNEA+YDIC R L + P++ +LN LI +S +T SLRF G LN DL + N
Sbjct: 198 DECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVN 257
Query: 585 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 406
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 258 LIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAM 317
Query: 405 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 226
+RG + K+V+ I ++ K + FV+W P K + PPT ++ A +
Sbjct: 318 FRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSVCDIPPT--------GIKMASTFV 369
Query: 225 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 58
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 370 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 425
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 189 bits (460), Expect = 2e-48
Identities = 88/236 (37%), Positives = 139/236 (58%)
Frame = -1
Query: 765 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 586
D ++DNEA+YDIC R L + P++ +LN LI +S +T SLRF G LN DL + N
Sbjct: 198 DECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVN 257
Query: 585 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 406
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 258 LIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAI 317
Query: 405 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 226
+RG + K+V+ I I+ K + FV+W P K + PP ++ A +
Sbjct: 318 FRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPP--------KGLKMAATFV 369
Query: 225 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 58
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 370 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 425
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 188 bits (457), Expect = 5e-48
Identities = 88/236 (37%), Positives = 139/236 (58%)
Frame = -1
Query: 765 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 586
D ++DNEA+YDIC R L + PT+ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 585 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 406
L+P+PR+HF +V +AP+ S + LSV E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAV 316
Query: 405 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 226
+RG + K+V+ + I+ K + FV+W P K + + P G ++ A +
Sbjct: 317 FRGKLSTKEVDEQMMNIQNKNSSYFVEWIPNNVKSSV----CDIAPKG----LKMASTFI 368
Query: 225 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 58
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 188 bits (457), Expect = 5e-48
Identities = 86/236 (36%), Positives = 139/236 (58%)
Frame = -1
Query: 765 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 586
D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 585 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 406
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMMCAADPRHGRYLTASAM 316
Query: 405 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 226
+RG + K+V+ + ++ K + FV+W P K + PPT ++ A +
Sbjct: 317 FRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFI 368
Query: 225 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 58
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 187 bits (456), Expect = 6e-48
Identities = 86/236 (36%), Positives = 139/236 (58%)
Frame = -1
Query: 765 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 586
D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 585 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 406
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAM 316
Query: 405 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 226
+RG + K+V+ + ++ K + FV+W P K + PPT ++ A +
Sbjct: 317 FRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFI 368
Query: 225 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 58
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 187 bits (456), Expect = 6e-48
Identities = 86/236 (36%), Positives = 139/236 (58%)
Frame = -1
Query: 765 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 586
D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 585 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 406
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAM 316
Query: 405 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 226
+RG + K+V+ + ++ K + FV+W P K + PPT ++ A +
Sbjct: 317 FRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFI 368
Query: 225 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 58
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 187 bits (456), Expect = 6e-48
Identities = 87/236 (36%), Positives = 139/236 (58%)
Frame = -1
Query: 765 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 586
D ++DNEA+YDIC R L + PT+ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 585 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 406
L+P+PR+HF +V +AP+ S + LSV E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAV 316
Query: 405 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 226
+RG + K+V+ + ++ K + FV+W P K + + P G ++ A +
Sbjct: 317 FRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSV----CDIAPTG----LKMASTFI 368
Query: 225 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 58
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 187 bits (455), Expect = 8e-48
Identities = 86/236 (36%), Positives = 139/236 (58%)
Frame = -1
Query: 765 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 586
D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 585 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 406
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAM 316
Query: 405 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 226
+RG + K+V+ + ++ K + FV+W P K + PPT ++ A +
Sbjct: 317 FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFI 368
Query: 225 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 58
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 184 bits (449), Expect = 4e-47
Identities = 85/236 (36%), Positives = 138/236 (58%)
Frame = -1
Query: 765 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 586
D ++DNEA+YDIC R L + P++ +LN LI +S +T LRF G LN DL + N
Sbjct: 197 DECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVN 256
Query: 585 LVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 406
L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+ +
Sbjct: 257 LIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAM 316
Query: 405 YRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCML 226
+RG + K+V+ + ++ K + FV+W P K + + P G + A +
Sbjct: 317 FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV----CDIAPRG----LSMASTFI 368
Query: 225 SNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 58
N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 105 bits (252), Expect = 3e-23
Identities = 63/245 (25%), Positives = 124/245 (50%), Gaps = 10/245 (4%)
Frame = -1
Query: 765 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 586
DC ++DN A+ I L + PT+ N L+ ++S+ T +LR+ G +N DL +
Sbjct: 200 DCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLAS 259
Query: 585 LVPYPRIHFPLVTYAPV-ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH-----GKY 424
L+P PR HF + Y P+ + + + +V ++ + N MV R+ KY
Sbjct: 260 LIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKY 319
Query: 423 MACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 244
++ + +G+V P V+ ++ I+ ++ + F+DW P +V ++ + P V ++ +
Sbjct: 320 ISILNIIQGEVDPTQVHESLQRIRERKLVNFIDWGPASIQVALSKKSPYVQTSHRVSGL- 378
Query: 243 RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAAL 76
ML++ T+I ++R ++D + K+AF+ Y M + EF E+R+ + +L
Sbjct: 379 ----MLASHTSIRHLFSRCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESL 434
Query: 75 EKDYE 61
+Y+
Sbjct: 435 VDEYK 439
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 102 bits (244), Expect = 3e-22
Identities = 61/245 (24%), Positives = 124/245 (50%), Gaps = 10/245 (4%)
Frame = -1
Query: 765 DCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 586
DC ++DN A+ I L + PT+ N L+ ++S+ T +LR+ G +N DL +
Sbjct: 200 DCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLAS 259
Query: 585 LVPYPRIHFPLVTYAPV-ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH-----GKY 424
L+P PR HF + Y P+ + + + +V ++ + N MV R+ KY
Sbjct: 260 LIPTPRCHFLMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKY 319
Query: 423 MACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQ 244
++ + +G+V P V+ ++ I+ ++ + F++W P +V ++ + P V ++ +
Sbjct: 320 ISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSKKSPYVQTAHRVSGL- 378
Query: 243 RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM----EEGEFSEAREDLAAL 76
ML++ T+I +++ ++D + K+AF+ Y M + EF E+R+ + +L
Sbjct: 379 ----MLASHTSIRHLFSKCLSQYDKLRKKQAFLDNYRKFPMFADNDLSEFDESRDIIESL 434
Query: 75 EKDYE 61
+Y+
Sbjct: 435 VDEYK 439
>At1g70140.1 68414.m08071 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 760
Score = 35.5 bits (78), Expect = 0.039
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 652 LDHCFFEIRRRSECGPHRVPD*LGALPPYPLPTGHVRASHLCREG 518
L C RRR GP RV + L PP P+ + V + L REG
Sbjct: 97 LQRCIIARRRRDRVGPVRVENTLPPYPPPPMTSAAVTTTTLAREG 141
>At5g33320.1 68418.m03955 triose phosphate/phosphate translocator,
putative similar to SWISS-PROT:P52178 triose
phosphate/phosphate translocator [Cauliflower] {Brassica
oleracea}
Length = 408
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 191 ALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTW 84
A ++S + +P+V+S S R WR SS P+R W
Sbjct: 31 AASSSDLNVSPNVVSIPSLSRRSWRLASSDSPLRAW 66
>At3g62210.1 68416.m06989 expressed protein contains Pfam profile
PF04396: Protein of unknown function, DUF537; expression
supported by MPSS
Length = 279
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 367 GRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGLE 474
GRV I Y D + + H H L TG+ HH+ G++
Sbjct: 59 GRVSISAYGDTSGIPHVIQHALNSTGIELHHVPAGVK 95
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 32.7 bits (71), Expect = 0.28
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Frame = -2
Query: 575 TPVSTS-HWSRTRQSSLPRRPTMNSFPSPRSQTHASSPPTRW*NATPVMASTWLAVCCTV 399
TP+S S S +R + +PT ++ S S T S+P T +A P ++T L+ T
Sbjct: 236 TPMSRSTSLSSSRLTPTASKPTTSTARSAGSVTR-STPSTTTKSAGPSRSTTPLSRS-TA 293
Query: 398 VTSYPRM*TRPSLPSKPSVLSNSSTGVQPV-SRSVSTTSHPP 276
+S P +RP+LP ++ +S+ +P+ S S +TT+ P
Sbjct: 294 RSSTPT--SRPTLPPSKTISRSSTPTRRPIASASAATTTANP 333
>At3g08670.1 68416.m01007 expressed protein
Length = 567
Score = 31.5 bits (68), Expect = 0.64
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = -2
Query: 608 TSPSSRLTWCLTPVSTSHWSRTRQSSLPR--RPTMNSFPSPRSQTHASSPPTRW*NATPV 435
+SPSSR + P + + S +SS P RP +S +++ SS P +TP
Sbjct: 194 SSPSSRSSSSARPSTPTRTSSASRSSTPSRIRPGSSSSSMDKARPSLSSRP-----STPT 248
Query: 434 MASTWLAVCCTVVTSYPRM*TRPSLPSK--PSVLSNSSTGVQPVS 306
A ++ S P +RPS P++ PS S S+T +S
Sbjct: 249 SRPQLSASSPNIIASRPN--SRPSTPTRRSPSSTSLSATSGPTIS 291
>At1g01190.1 68414.m00032 cytochrome P450, putative similar to
cytochrome P450 SP:O48927 from [Glycine max]
Length = 535
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 618 LNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNA 478
+++D NL+P PR FPLV + S+ A+ SVAE++NA
Sbjct: 62 ISLDYNRKYKNLIPGPR-GFPLVGSMSLRSSHVAHQRIASVAEMSNA 107
>At1g29200.1 68414.m03573 hypothetical protein contains Pfam
PF03138: Plant protein family. The function of this
family of plant proteins is unknown;
Length = 698
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 286 LVVDTDLETGWTPVDELDSTLGFDGSDGRVHILGY 390
LV DT+L TPVD ++ L G VH+ GY
Sbjct: 360 LVTDTELVKEATPVDYIEHVLPLLKKYGMVHLFGY 394
>At3g51540.1 68416.m05644 expressed protein mucin 5AC, Homo sapiens,
PIR:S53363
Length = 438
Score = 29.5 bits (63), Expect = 2.6
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 11/121 (9%)
Frame = -2
Query: 608 TSPSSRLTWCLTPVSTSHWSRTRQSSLPRRPTMN------SFPSPRSQTHASSPP----T 459
+ PSSR T + + S+ R SS+P++ T S SP+ S P T
Sbjct: 107 SDPSSRPTRSGSTIRPSNIPTIRSSSVPKKTTTTQIQASASVSSPKRTVSRSLTPSSRKT 166
Query: 458 RW*NATPVMASTWLAVCCTVVTSYPRM*TRPSLP-SKPSVLSNSSTGVQPVSRSVSTTSH 282
+TP ST + + T+ +R P +KP + +N+S+ RS S TS
Sbjct: 167 PSPTSTPSRISTTTSTTPSFKTAGDAQRSRSLTPRAKPQIAANASSRTN--VRSSSVTSR 224
Query: 281 P 279
P
Sbjct: 225 P 225
>At1g37130.1 68414.m04639 nitrate reductase 2 (NR2) identical to
SP|P11035 Nitrate reductase 2 (formerly EC 1.6.6.1)
(NR2) {Arabidopsis thaliana}
Length = 917
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 63 RNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRT 179
R +R +PG +G+ R+ PP P R S + H +T +T
Sbjct: 8 RQYARLEPGLNGVVRSYKPPVPGRSDSPKAHQNQTTNQT 46
>At2g33835.1 68415.m04152 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 587
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -1
Query: 402 RGDVVPKDVNAAIATIKTKRTIQFVDWCPT-GFKVGINYQPPTVVPGGD 259
+G V D A T TK+ + DW P+ FK PP ++P D
Sbjct: 308 QGVAVSSDKGAEANTTSTKKKVSSDDWEPSEPFKASFTI-PPYILPSSD 355
>At2g15020.1 68415.m01710 expressed protein and genefinder
Length = 526
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = -1
Query: 624 GALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVK 448
G N+ L +F ++L+P + F T A + K Y LS+ N+ E N++VK
Sbjct: 212 GLGNLGLKQFSSSLMPRHSLGFSYATEAHGLWILKGYFPILSMNVTNNSSNEVHNKIVK 270
>At1g68080.1 68414.m07777 expressed protein
Length = 383
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 328 DELDSTLGFDGSDGRVHILGYDVTTVQ 408
D + +GFD R+H+LG+DV ++Q
Sbjct: 211 DGSNQNIGFDVCVARLHLLGFDVHSLQ 237
>At1g62870.1 68414.m07099 expressed protein
Length = 796
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -2
Query: 593 RLTWCLTPVSTSHWSRTRQSSLPRR--PTMNSFPSPRSQTHASSPP 462
R + C S S+ SRT L R P NS P P S S PP
Sbjct: 80 RCSLCDAVFSASNPSRTASEHLKRGTCPNFNSLPKPISTISPSPPP 125
>At3g26855.1 68416.m03360 hypothetical protein
Length = 163
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 170 SCTPSVLSCTGTSVRVWRRESSPK 99
SC P +LS + VR W +SSPK
Sbjct: 114 SCNPMLLSTFPSIVRAWDGKSSPK 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,820,704
Number of Sequences: 28952
Number of extensions: 423081
Number of successful extensions: 1654
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1640
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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