Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10f19f
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 358 2e-99
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 358 2e-99
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 358 2e-99
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 356 1e-98
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 332 1e-91
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 332 1e-91
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 331 3e-91
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 329 1e-90
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 328 2e-90
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 326 9e-90
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 326 9e-90
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 326 1e-89
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 308 2e-84
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 303 7e-83
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 288 2e-78
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 259 1e-69
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 171 4e-43
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 170 9e-43
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 169 2e-42
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 167 6e-42
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 167 6e-42
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 166 1e-41
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 146 1e-35
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 146 1e-35
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 93 2e-19
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 93 2e-19
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.44
AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical ... 30 1.3
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 3.1
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 3.1
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 3.1
AL110485-19|CAB60367.2| 529|Caenorhabditis elegans Hypothetical... 28 5.4
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 5.4
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 7.2
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 7.2
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 7.2
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 7.2
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 7.2
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 7.2
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 7.2
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 7.2
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 358 bits (880), Expect = 2e-99
Identities = 161/195 (82%), Positives = 176/195 (90%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTX 640
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVST
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 641 VVEPYNSILTTHTTL 685
VVEPYNSILTTHTTL
Sbjct: 181 VVEPYNSILTTHTTL 195
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 358 bits (880), Expect = 2e-99
Identities = 161/195 (82%), Positives = 176/195 (90%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTX 640
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVST
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 641 VVEPYNSILTTHTTL 685
VVEPYNSILTTHTTL
Sbjct: 181 VVEPYNSILTTHTTL 195
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 358 bits (880), Expect = 2e-99
Identities = 161/195 (82%), Positives = 176/195 (90%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTX 640
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVST
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 641 VVEPYNSILTTHTTL 685
VVEPYNSILTTHTTL
Sbjct: 181 VVEPYNSILTTHTTL 195
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 356 bits (875), Expect = 1e-98
Identities = 160/194 (82%), Positives = 175/194 (90%)
Frame = +2
Query: 104 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 283
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 284 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 464 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTXV 643
IR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQVST V
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAV 180
Query: 644 VEPYNSILTTHTTL 685
VEPYNSILTTHTTL
Sbjct: 181 VEPYNSILTTHTTL 194
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 332 bits (816), Expect = 1e-91
Identities = 151/195 (77%), Positives = 170/195 (87%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTX 640
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVST
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 641 VVEPYNSILTTHTTL 685
VVEPYNSILTTHTTL
Sbjct: 179 VVEPYNSILTTHTTL 193
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 332 bits (816), Expect = 1e-91
Identities = 151/195 (77%), Positives = 170/195 (87%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTX 640
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVST
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 641 VVEPYNSILTTHTTL 685
VVEPYNSILTTHTTL
Sbjct: 179 VVEPYNSILTTHTTL 193
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 331 bits (813), Expect = 3e-91
Identities = 150/195 (76%), Positives = 170/195 (87%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTX 640
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVST
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 641 VVEPYNSILTTHTTL 685
VVEPYNSILTTHTTL
Sbjct: 179 VVEPYNSILTTHTTL 193
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 329 bits (808), Expect = 1e-90
Identities = 149/195 (76%), Positives = 169/195 (86%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTX 640
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQV T
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTA 178
Query: 641 VVEPYNSILTTHTTL 685
VVEPYNSILTTHTTL
Sbjct: 179 VVEPYNSILTTHTTL 193
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 328 bits (806), Expect = 2e-90
Identities = 147/196 (75%), Positives = 167/196 (85%)
Frame = +2
Query: 98 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 277
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 278 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 457
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 458 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST 637
DR+R+L + C GLQGFL+FH LLMERLSVDYGKKSKLEF IYPAPQVST
Sbjct: 125 DRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVST 184
Query: 638 XVVEPYNSILTTHTTL 685
+VEPYNSILTTHTTL
Sbjct: 185 SMVEPYNSILTTHTTL 200
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 326 bits (801), Expect = 9e-90
Identities = 148/195 (75%), Positives = 168/195 (86%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTX 640
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVST
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 641 VVEPYNSILTTHTTL 685
VVEPYNSILTTHTTL
Sbjct: 179 VVEPYNSILTTHTTL 193
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 326 bits (801), Expect = 9e-90
Identities = 148/195 (75%), Positives = 168/195 (86%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTX 640
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQVST
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 641 VVEPYNSILTTHTTL 685
VVEPYNSILTTHTTL
Sbjct: 179 VVEPYNSILTTHTTL 193
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 326 bits (800), Expect = 1e-89
Identities = 143/195 (73%), Positives = 168/195 (86%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTX 640
R+R+L ++C LQGFLIFH L+MERLS+DYGKK+KLEF+IYPAPQ+ST
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTS 180
Query: 641 VVEPYNSILTTHTTL 685
+VEPYNS+LTTHTTL
Sbjct: 181 MVEPYNSLLTTHTTL 195
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 308 bits (757), Expect = 2e-84
Identities = 140/195 (71%), Positives = 159/195 (81%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTX 640
RIR+LA+ C GLQGF +FH +LMERLS +YGKKSKLEF+IYPAPQ+ST
Sbjct: 118 RIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTS 177
Query: 641 VVEPYNSILTTHTTL 685
VVEPYNSILTTHTTL
Sbjct: 178 VVEPYNSILTTHTTL 192
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 303 bits (744), Expect = 7e-83
Identities = 138/194 (71%), Positives = 158/194 (81%)
Frame = +2
Query: 104 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 283
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 284 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 464 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTXV 643
+++LA+ C GLQGF+IFH LLMERLS +YGKK KLEFAIYPAPQVST +
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSM 187
Query: 644 VEPYNSILTTHTTL 685
VEPYNSIL THTTL
Sbjct: 188 VEPYNSILMTHTTL 201
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 288 bits (707), Expect = 2e-78
Identities = 129/194 (66%), Positives = 153/194 (78%)
Frame = +2
Query: 104 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 283
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 284 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 464 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTXV 643
IRK + C GLQGFL+FH LLMERLSV++GKKSKLEF++YPAPQVST V
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSV 184
Query: 644 VEPYNSILTTHTTL 685
VEPYNSILTTHTTL
Sbjct: 185 VEPYNSILTTHTTL 198
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 259 bits (635), Expect = 1e-69
Identities = 118/173 (68%), Positives = 138/173 (79%)
Frame = +2
Query: 167 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 346
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 347 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXX 526
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 527 XXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTXVVEPYNSILTTHTTL 685
LLMERLS +YGKK KLEFAIYPAPQVST +VEPYNSIL THTTL
Sbjct: 121 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTL 173
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 171 bits (416), Expect = 4e-43
Identities = 83/192 (43%), Positives = 115/192 (59%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTX 640
+RK A+ C LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 641 VVEPYNSILTTH 676
VVEPYN+ L+ H
Sbjct: 179 VVEPYNATLSVH 190
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 170 bits (413), Expect = 9e-43
Identities = 83/192 (43%), Positives = 116/192 (60%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTX 640
IRK A+ C LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 641 VVEPYNSILTTH 676
VVEPYN+ L+ H
Sbjct: 179 VVEPYNATLSVH 190
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 169 bits (410), Expect = 2e-42
Identities = 82/192 (42%), Positives = 116/192 (60%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTX 640
IRK A+ C LQGF + H LL+ ++ ++ + F++ P+P+VS
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDT 178
Query: 641 VVEPYNSILTTH 676
VVEPYN+ L+ H
Sbjct: 179 VVEPYNATLSVH 190
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 167 bits (406), Expect = 6e-42
Identities = 81/192 (42%), Positives = 115/192 (59%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTX 640
+RK A+ LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 641 VVEPYNSILTTH 676
VVEPYN+ L+ H
Sbjct: 179 VVEPYNATLSVH 190
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 167 bits (406), Expect = 6e-42
Identities = 81/192 (42%), Positives = 115/192 (59%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTX 640
+RK A+ LQGF + H LL+ ++ +Y + F++ P+P+VS
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 641 VVEPYNSILTTH 676
VVEPYN+ L+ H
Sbjct: 179 VVEPYNATLSVH 190
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 166 bits (404), Expect = 1e-41
Identities = 80/192 (41%), Positives = 112/192 (58%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTX 640
+RK A+ C LQGF + H LL+ ++ +Y + + F++ P+P+VS
Sbjct: 119 VVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDT 178
Query: 641 VVEPYNSILTTH 676
VVEPYN+ L+ H
Sbjct: 179 VVEPYNATLSVH 190
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 146 bits (354), Expect = 1e-35
Identities = 76/190 (40%), Positives = 109/190 (57%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTX 640
IR+ A+ L+GF + H LL+ +L +Y K+ +I P+ +VS
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDT 178
Query: 641 VVEPYNSILT 670
VVEPYN+IL+
Sbjct: 179 VVEPYNAILS 188
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 146 bits (354), Expect = 1e-35
Identities = 76/190 (40%), Positives = 109/190 (57%)
Frame = +2
Query: 101 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 280
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 281 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 460
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 461 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTX 640
IR+ A+ L+GF + H LL+ +L +Y K+ +I P+ +VS
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDT 178
Query: 641 VVEPYNSILT 670
VVEPYN+IL+
Sbjct: 179 VVEPYNAILS 188
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 93.1 bits (221), Expect = 2e-19
Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Frame = +2
Query: 113 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 292
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 293 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 463
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 464 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST-X 640
I + A+ L G L H LL+ERL + KK ++++ ST
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 641 VVEPYNSILT 670
VV PYN +L+
Sbjct: 184 VVHPYNWVLS 193
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 93.1 bits (221), Expect = 2e-19
Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Frame = +2
Query: 113 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 292
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 293 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 463
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 464 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST-X 640
I + A+ L G L H LL+ERL + KK ++++ ST
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 641 VVEPYNSILT 670
VV PYN +L+
Sbjct: 184 VVHPYNWVLS 193
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.44
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 129 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 284
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AL021447-2|CAA16273.2| 807|Caenorhabditis elegans Hypothetical
protein F19B2.6 protein.
Length = 807
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 610 HLPRASGFHXRRRALQLYPHHPHNP 684
H P SG+H + YP+HP NP
Sbjct: 411 HEPAPSGYHPPQAQSNCYPNHPPNP 435
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 143 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 322
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 323 VDE 331
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 143 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 322
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 323 VDE 331
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 143 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 322
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 323 VDE 331
DE
Sbjct: 116 ADE 118
>AL110485-19|CAB60367.2| 529|Caenorhabditis elegans Hypothetical
protein Y46G5A.24 protein.
Length = 529
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -3
Query: 634 GNLRRGVDGELQFRLLAVVNGETLHQ*GSEPRAGTSTEGVEDQESLQTGTLVSELADSVQ 455
GNL V +L+F + N E HQ EP + EG+E+ + G L+ + S +
Sbjct: 435 GNLAGVVKADLKFGNHLIWNRENPHQICGEPIFVPNPEGIEEDD----GILIVPIMSSSE 490
Query: 454 NQI 446
Q+
Sbjct: 491 KQV 493
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 391 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 296
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 320 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 320 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 320 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 320 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 320 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 320 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 320 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 320 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 463
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,253,923
Number of Sequences: 27780
Number of extensions: 353929
Number of successful extensions: 871
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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