Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10f18r
         (767 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5K520 Cluster: Putative uncharacterized protein; n=1; ...    36   1.5  
UniRef50_Q16FS2 Cluster: Putative uncharacterized protein; n=1; ...    34   4.5  
UniRef50_Q4Z0Y5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  

>UniRef50_A5K520 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 3136

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +1

Query: 10   NVLETNT-NEYYISHNKLHTSS-CLSTVRVYSAI*TNNLASFYLALV*LMINIKKVVPYI 183
            N  ETN  N  +I  N LH S  CL+  R+     T  +   +L+L+   +NIK V+P++
Sbjct: 2910 NNYETNLINRLFIEQNNLHKSRFCLNEKRILKTC-TKYVVESFLSLLDKQVNIKNVIPFM 2968


>UniRef50_Q16FS2 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 569

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +2

Query: 290 IYLYSLILTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRH 418
           ++ Y  +L  H  THT  +   C  C    SC N++ K++ RH
Sbjct: 367 LFRYPSLLRDHETTHTGERLYQCLHCPKTYSCKNSFRKHVDRH 409


>UniRef50_Q4Z0Y5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 66

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 20/47 (42%), Positives = 27/47 (57%)
 Frame = -3

Query: 591 ESYVLWFIDFLIQKDRKKNYNYLTSCLLIDYP*MKCNYKYDAFHNYL 451
           E  +L+  DF  QK +KK YN L  C+ I +  M+C+   D  HNYL
Sbjct: 20  EMILLFLNDF--QKKKKKTYNILYICIFIHF--MECS---DIVHNYL 59


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,050,413
Number of Sequences: 1657284
Number of extensions: 11150055
Number of successful extensions: 27265
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27230
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)