Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10f18r
         (767 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.88 
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    24   1.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    24   1.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   2.7  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    22   6.2  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   8.2  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   8.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = -1

Query: 242 MMFTCQIYFLTIHFTLCVGVM*GTTFLILIINY 144
           ++F C     T+HF LC         ++L + Y
Sbjct: 83  LLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYY 115


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 311 LTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRHA 421
           +T HM TH+  +   C+ C    S  +   K+L  H+
Sbjct: 65  VTTHMRTHSGERPYRCRLCKKAFSDSSTLTKHLRIHS 101



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +2

Query: 311 LTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRHA 421
           LT H+ TH+  K   C  C    S  ++   ++  H+
Sbjct: 37  LTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHS 73


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 311 LTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRHA 421
           +T HM TH+  +   C+ C    S  +   K+L  H+
Sbjct: 321 VTTHMRTHSGERPYRCRLCKKAFSDSSTLTKHLRIHS 357



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +2

Query: 311 LTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRHA 421
           LT H+ TH+  K   C  C    S  ++   ++  H+
Sbjct: 293 LTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHS 329


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +2

Query: 299 YSLILTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRH 418
           Y  +L  H  THT  K  +C+ C    + D++   ++  H
Sbjct: 146 YKHVLQNHERTHTGEKPFECQECHKRFTRDHHLKTHMRLH 185


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 308 ILTCHMNTHTYTK*TDCKFC 367
           +L  H+ THT  K   C +C
Sbjct: 22  LLQGHIRTHTGEKPFSCTYC 41


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 229 HVNIILRSIVCWTFNLLLC 285
           +V +I    VC  +N+LLC
Sbjct: 235 NVTVISWQAVCTFYNILLC 253


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 229 HVNIILRSIVCWTFNLLLC 285
           +V +I    VC  +N+LLC
Sbjct: 235 NVTVISWQAVCTFYNILLC 253


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 229 HVNIILRSIVCWTFNLLLC 285
           +V +I    VC  +N+LLC
Sbjct: 555 NVTVISWQAVCTFYNILLC 573


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,543
Number of Sequences: 336
Number of extensions: 3342
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)