Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10f18r
         (767 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X65230-1|CAA46337.1|  227|Homo sapiens zinc-finger protein  (ZNF...    33   1.5  
BC062561-1|AAH62561.1|  545|Homo sapiens zinc finger protein 77 ...    33   1.5  
BC043354-1|AAH43354.2|  545|Homo sapiens zinc finger protein 77 ...    33   1.5  
BC009374-1|AAH09374.1|  455|Homo sapiens zinc finger protein 556...    31   3.4  
AL365370-1|CAB96946.1|  276|Homo sapiens hypothetical protein, s...    31   3.4  
AK021699-1|BAB13878.1|  456|Homo sapiens protein ( Homo sapiens ...    31   3.4  

>X65230-1|CAA46337.1|  227|Homo sapiens zinc-finger protein
           (ZNFpT1) protein.
          Length = 227

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 293 YLYSLILTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRHAT 424
           ++Y   LT H+ THT  K  +CK C    SC  +YF+  +R  T
Sbjct: 156 FMYYSYLTRHVRTHTGEKPYECKECGKAFSCP-SYFREHVRTHT 198


>BC062561-1|AAH62561.1|  545|Homo sapiens zinc finger protein 77
           protein.
          Length = 545

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 293 YLYSLILTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRHAT 424
           ++Y   LT H+ THT  K  +CK C    SC  +YF+  +R  T
Sbjct: 249 FMYYSYLTRHVRTHTGEKPYECKECGKAFSCP-SYFREHVRTHT 291



 Score = 31.5 bits (68), Expect = 3.4
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 293 YLYSLILTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRHA 421
           Y +S  L  H+ THT  K  +CK C    SC ++  +++  H+
Sbjct: 417 YSFSSSLRIHVRTHTGEKPFECKHCGKAFSCHSSLREHVRTHS 459


>BC043354-1|AAH43354.2|  545|Homo sapiens zinc finger protein 77
           protein.
          Length = 545

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 293 YLYSLILTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRHAT 424
           ++Y   LT H+ THT  K  +CK C    SC  +YF+  +R  T
Sbjct: 249 FMYYSYLTRHVRTHTGEKPYECKECGKAFSCP-SYFREHVRTHT 291



 Score = 31.5 bits (68), Expect = 3.4
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 293 YLYSLILTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRHA 421
           Y +S  L  H+ THT  K  +CK C    SC ++  +++  H+
Sbjct: 417 YSFSSSLRIHVRTHTGEKPFECKHCGKAFSCHSSLREHVRTHS 459


>BC009374-1|AAH09374.1|  455|Homo sapiens zinc finger protein 556
           protein.
          Length = 455

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2

Query: 293 YLYSLILTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRHA 421
           +L S  LT H+ THT  K  +C  C    SC  ++  +++ HA
Sbjct: 211 FLRSHSLTEHVRTHTGEKPYECGQCGKGFSCPKSFRAHVMMHA 253


>AL365370-1|CAB96946.1|  276|Homo sapiens hypothetical protein,
           similar to (AB021644)GONADOTROPIN INDUCIBLE
           TRANSCRIPTION protein.
          Length = 276

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 293 YLYSLILTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRHA 421
           Y +S  L  H+ THT  K  +CK C    SC ++  +++  H+
Sbjct: 148 YSFSSSLRIHVRTHTGEKPFECKHCGKAFSCHSSLREHVRTHS 190


>AK021699-1|BAB13878.1|  456|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11637 fis, clone HEMBA1004321, weakly similar to
           ZINC FINGER PROTEIN 184. ).
          Length = 456

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +2

Query: 293 YLYSLILTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRHA 421
           +L S  LT H+ THT  K  +C  C    SC  ++  +++ HA
Sbjct: 212 FLRSHSLTEHVRTHTGEKPYECGQCGKGFSCPKSFRAHVMMHA 254


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,078,077
Number of Sequences: 237096
Number of extensions: 1682961
Number of successful extensions: 4744
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4744
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)