Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10f18f
         (596 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    24   1.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    24   1.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   2.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.6  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    22   4.5  

>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 557 LTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRHA 447
           +T HM TH+  +   C+ C    S  +   K+L  H+
Sbjct: 65  VTTHMRTHSGERPYRCRLCKKAFSDSSTLTKHLRIHS 101



 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = -1

Query: 557 LTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRHA 447
           LT H+ TH+  K   C  C    S  ++   ++  H+
Sbjct: 37  LTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHS 73


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 557 LTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRHA 447
           +T HM TH+  +   C+ C    S  +   K+L  H+
Sbjct: 321 VTTHMRTHSGERPYRCRLCKKAFSDSSTLTKHLRIHS 357



 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = -1

Query: 557 LTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRHA 447
           LT H+ TH+  K   C  C    S  ++   ++  H+
Sbjct: 293 LTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHS 329


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -1

Query: 569 YSLILTCHMNTHTYTK*TDCKFCTNNKSCDNNYFKYLIRH 450
           Y  +L  H  THT  K  +C+ C    + D++   ++  H
Sbjct: 146 YKHVLQNHERTHTGEKPFECQECHKRFTRDHHLKTHMRLH 185


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 14/67 (20%)
 Frame = -3

Query: 186 RIVYIYFINRSFNVN---LACS---IVRNVIYW*FI------LLL*YGHNY--LILICAL 49
           RI Y Y ++ +FNV+   L CS    V  + Y  FI      LL  Y   Y  +IL+C  
Sbjct: 55  RIYYFYCVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVY 114

Query: 48  LIYSPFV 28
             Y  F+
Sbjct: 115 YFYYAFI 121


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 560 ILTCHMNTHTYTK*TDCKFC 501
           +L  H+ THT  K   C +C
Sbjct: 22  LLQGHIRTHTGEKPFSCTYC 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,818
Number of Sequences: 336
Number of extensions: 2821
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)