Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10f18f
         (596 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    28   0.26 
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            26   0.80 
DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormo...    23   7.5  
AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled ...    23   7.5  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 27.9 bits (59), Expect = 0.26
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -1

Query: 548 HMNTHTYTK*TDCKFCTN 495
           H+NTHT TK   CK C N
Sbjct: 173 HVNTHTGTKPHRCKHCDN 190


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 26.2 bits (55), Expect = 0.80
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +2

Query: 233 RLIYFALRSLKL--LSVSHMFCGLLTSSSKRIGKKIITI 343
           RL Y  L   +L  LSV H    L T  SK+ G  I+T+
Sbjct: 177 RLSYLNLTQNRLRDLSVFHFSASLSTRLSKKCGSSIVTL 215


>DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormone
           receptor protein.
          Length = 354

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 334 YNYLTSCLLIDYP*MKCNYKYDAFHNYLFVYT 429
           YN L  CL+  +P +   Y Y + +  +F  T
Sbjct: 212 YNVLVMCLMYTFPLIVILYCYGSIYYEIFSRT 243


>AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 354

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 334 YNYLTSCLLIDYP*MKCNYKYDAFHNYLFVYT 429
           YN L  CL+  +P +   Y Y + +  +F  T
Sbjct: 212 YNVLVMCLMYTFPLIVILYCYGSIYYEIFSRT 243


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,042
Number of Sequences: 2352
Number of extensions: 11625
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)