Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10f17r
(778 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 36 0.001
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 33 0.013
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 27 0.65
AY347946-1|AAR28374.1| 640|Anopheles gambiae putative NPY GPCR ... 26 1.5
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 25 3.5
DQ974163-1|ABJ52803.1| 595|Anopheles gambiae serpin 4B protein. 23 8.0
CR954257-5|CAJ14156.1| 227|Anopheles gambiae predicted protein ... 23 8.0
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 36.3 bits (80), Expect = 0.001
Identities = 31/108 (28%), Positives = 37/108 (34%), Gaps = 5/108 (4%)
Frame = -2
Query: 312 GREDGAVARAGTGAPHP--GQEGERAPAARGRLQGEAHVRLLRG-EAASGLPAREVERGA 142
G G R G P G EG + P GE R G + G+P R G
Sbjct: 401 GAPGGGEGRPGAPGPKGPRGYEGPQGPKGMDGFDGEKGERGQMGPKGGQGVPGRPGPEGM 460
Query: 141 PSRPEAHGRLDSEQRD--QGDHSGPGEAGPGPLHRGPGFAGQEVNGSE 4
P G S QG PG+ GP L PG G + G +
Sbjct: 461 PGDKGDKGESGSVGMPGPQGPRGYPGQPGPEGLRGEPGQPGYGIPGQK 508
Score = 32.3 bits (70), Expect = 0.017
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
Frame = -2
Query: 276 GAPH-PGQEGERAPAARGRLQGEAHVRLLRGEAAS-------GLPAREVERGAPSRPEAH 121
GAP PG++GE+ R L G R L+GE G+ + ERG P
Sbjct: 544 GAPGLPGRDGEKGEPGRPGLPGAKGERGLKGELGGRCTDCRPGMKGDKGERGYAGEPGRP 603
Query: 120 GRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQ 22
G ++G PGE G L PG G+
Sbjct: 604 G-ASGVPGERGYPGMPGEDGTPGLRGEPGPKGE 635
Score = 31.9 bits (69), Expect = 0.023
Identities = 39/119 (32%), Positives = 50/119 (42%), Gaps = 7/119 (5%)
Frame = -2
Query: 345 PNRESTGGRNRGREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLLRGEAA-SGL 169
P + T G RG E G G P PG GE A + ++ +GE +GL
Sbjct: 618 PGEDGTPGL-RG-EPGPKGEPGLLGP-PGPSGEPGRDAEIPMDQLKPIKGDKGEKGENGL 674
Query: 168 PAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAG----PG-PLHRG-PGFAGQEVNG 10
+ E+G P G++ +GD PGEAG PG P G PG GQ V G
Sbjct: 675 MGIKGEKGFPGPVGPEGKMGLRGM-KGDKGRPGEAGIDGAPGAPGKDGLPGRHGQTVKG 732
Score = 30.7 bits (66), Expect = 0.053
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = -2
Query: 264 PGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGD 85
PGQ+G A L+G+ R +G + A+E GAP P GR D E+ + G
Sbjct: 505 PGQKGNAGMAGFPGLKGQKGERGFKGVMGTPGDAKEGRPGAPGLP---GR-DGEKGEPGR 560
Query: 84 HSGPGEAG 61
PG G
Sbjct: 561 PGLPGAKG 568
Score = 23.8 bits (49), Expect = 6.0
Identities = 25/93 (26%), Positives = 33/93 (35%), Gaps = 4/93 (4%)
Frame = -2
Query: 327 GGRNRGREDGAVARAGTGAPHPGQ--EGERAPAARGRLQGEAHVRLLRGEAAS-GLPARE 157
G R G G A HP +G++ L+G + GE G P R
Sbjct: 199 GPRGYAGIPGTKGEKGEPARHPENYNKGQKGEPGNDGLEGLPGPQ---GEVGPRGFPGRP 255
Query: 156 VERGAPSRPEAHG-RLDSEQRDQGDHSGPGEAG 61
E+G P P G R D +G+ G G
Sbjct: 256 GEKGVPGTPGVRGERGDKGVCIKGEKGQKGAKG 288
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 32.7 bits (71), Expect = 0.013
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Frame = -2
Query: 303 DGAVARAGTGAPHPGQEGERA----PAARGR--LQGEAHVRLLRGEAASGLPAREVERGA 142
DG AG P G +GE+ P G L GE L G GL R+ +RG
Sbjct: 405 DGLPGAAGPVGPR-GYDGEKGFKGEPGRIGERGLMGEKGDMGLTGPV--GLSGRKGDRGV 461
Query: 141 PSRPEAHGRLDSEQRDQGDHSGPGEAG-PGPLHRGPGFAGQ 22
P P + + + D+G+ PG G PG + PG +G+
Sbjct: 462 PGSPGLPATVAAIKGDKGEPGFPGAIGRPGKV-GVPGLSGE 501
Score = 29.5 bits (63), Expect = 0.12
Identities = 23/80 (28%), Positives = 33/80 (41%)
Frame = -2
Query: 261 GQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDH 82
G++G+R L G + +GE P R +G P P +G +GD
Sbjct: 681 GEKGDRGLPGMSGLNGAPGEKGQKGETPQLPPQR---KGPPGPPGFNG-------PKGDK 730
Query: 81 SGPGEAGPGPLHRGPGFAGQ 22
PG AGP + PG G+
Sbjct: 731 GLPGLAGPAGIPGAPGAPGE 750
Score = 27.5 bits (58), Expect = 0.49
Identities = 29/96 (30%), Positives = 36/96 (37%)
Frame = -2
Query: 345 PNRESTGGRNRGREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLLRGEAASGLP 166
P R GR+ G + G P G P+ QGE R G+ SGL
Sbjct: 552 PGRPGKTGRD-GPPGLTGEKGEPGLPVWKDRGPSGPSGPLGPQGEKGDR---GD--SGLM 605
Query: 165 AREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGP 58
R G P P+ L Q ++GD PG GP
Sbjct: 606 GRPGNDGLPG-PQGQRGLPGPQGEKGDQGPPGFIGP 640
Score = 25.8 bits (54), Expect = 1.5
Identities = 20/64 (31%), Positives = 23/64 (35%)
Frame = -2
Query: 261 GQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDH 82
G G PA L G GE P + E+G P RP GR D G+
Sbjct: 512 GLPGLPGPAGLNGLPGMKGDMGPLGEKGDACPVVKGEKGLPGRPGKTGR-DGPPGLTGEK 570
Query: 81 SGPG 70
PG
Sbjct: 571 GEPG 574
Score = 23.8 bits (49), Expect = 6.0
Identities = 27/104 (25%), Positives = 37/104 (35%), Gaps = 6/104 (5%)
Frame = -2
Query: 294 VARAGTGAP-HPGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAR---EVERGAPSRPE 127
V + G P PG+ G P +GE + + + SG + E+G
Sbjct: 544 VVKGEKGLPGRPGKTGRDGPPGLTGEKGEPGLPVWKDRGPSGPSGPLGPQGEKGDRGDSG 603
Query: 126 AHGRL--DSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVNGSER 1
GR D QG PG G PGF G + + ER
Sbjct: 604 LMGRPGNDGLPGPQGQRGLPGPQGEKGDQGPPGFIGPKGDKGER 647
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 27.1 bits (57), Expect = 0.65
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = -3
Query: 239 LQLEAAYRERLMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQA 60
LQ A + M+ S+ +R +L ++ + QK V +SN+ +A + ++Q
Sbjct: 304 LQASAGVTKVSMWQLSDGTKRARVRLPAKAAKQLVGQKLTVSCCISNIKEAPAINLQQQR 363
Query: 59 LDRCI 45
RC+
Sbjct: 364 CYRCL 368
>AY347946-1|AAR28374.1| 640|Anopheles gambiae putative NPY GPCR
protein.
Length = 640
Score = 25.8 bits (54), Expect = 1.5
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 456 QSGVIFVLHYIDFLAAQVCCQTHTKSVRTRHTSFRV 563
+SG I VLH + L CC HT R+ V
Sbjct: 575 RSGFILVLHGVPGLQQLCCCIRHTPPAIARNVGSSV 610
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 24.6 bits (51), Expect = 3.5
Identities = 20/49 (40%), Positives = 21/49 (42%)
Frame = -2
Query: 282 GTGAPHPGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPS 136
G G G G AP A G + G A V SGLPA GAPS
Sbjct: 3200 GAGLAMVGAGGSTAPGAGG-VPGVAVV------PGSGLPAAAASGGAPS 3241
>DQ974163-1|ABJ52803.1| 595|Anopheles gambiae serpin 4B protein.
Length = 595
Score = 23.4 bits (48), Expect = 8.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 239 LQLEAAYRERLMYAYSEVKRRLDYQLEKSNVER 141
+ L YR + M YS + LD++L+ S R
Sbjct: 170 IPLSDTYRNQSMTYYSSEVQSLDFELDTSGSTR 202
>CR954257-5|CAJ14156.1| 227|Anopheles gambiae predicted protein
protein.
Length = 227
Score = 23.4 bits (48), Expect = 8.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 677 PVRLVLCTRSVCSHLNAKP 733
P +V CTR+VC+ N P
Sbjct: 117 PSMIVKCTRNVCTGRNEVP 135
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 808,277
Number of Sequences: 2352
Number of extensions: 16833
Number of successful extensions: 47
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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