Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10f17f
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.52 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.52 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.52 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.52 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    25   0.52 
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   1.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   2.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.7  
AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.    22   4.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.4  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   8.4  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.4  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
 Frame = +2

Query: 368 HCWSWCMWLT*NSDQNW--LLGWTRKLKR 448
           H W W +WL     Q W  L  WT K +R
Sbjct: 463 HAWIWLLWLL---SQTWITLHIWTPKCER 488


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
 Frame = +2

Query: 368 HCWSWCMWLT*NSDQNW--LLGWTRKLKR 448
           H W W +WL     Q W  L  WT K +R
Sbjct: 463 HAWIWLLWLL---SQTWITLHIWTPKCER 488


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
 Frame = +2

Query: 368 HCWSWCMWLT*NSDQNW--LLGWTRKLKR 448
           H W W +WL     Q W  L  WT K +R
Sbjct: 463 HAWIWLLWLL---SQTWITLHIWTPKCER 488


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
 Frame = +2

Query: 368 HCWSWCMWLT*NSDQNW--LLGWTRKLKR 448
           H W W +WL     Q W  L  WT K +R
Sbjct: 463 HAWIWLLWLL---SQTWITLHIWTPKCER 488


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 212 PGSPLTGRAKVFWSCVATSEAEPRATSAVH 123
           P  P T RAK++  CV T+   P A S ++
Sbjct: 21  PSRPKT-RAKIYALCVVTALVTPSALSIIY 49


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 490 ALEDAIEGEKTEQWRAQGQELLIQAKK 570
           AL + +  E T  WR   Q +L+Q ++
Sbjct: 541 ALGEVLWSEPTNTWREAEQRILVQRER 567


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -3

Query: 357 VIFVLHYIDFLAAQVCCQTHTKSVRTRHTSFRVEELEPF 241
           VIF L+Y+  +   V  +     +R  H  F +  L  F
Sbjct: 261 VIFELYYLSHVCQNVSTEVIGNILRLMHRRFEITALRLF 299


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -3

Query: 462  PFVLGRFNFLVQPSSQFWSEFHVSHIH 382
            P + G  ++L +    FW+E    ++H
Sbjct: 1179 PLIRGEVHYLNRNEETFWNELIEQYLH 1205



 Score = 21.4 bits (43), Expect = 6.3
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +2

Query: 368 HCWSWCMWL 394
           H W W +WL
Sbjct: 450 HAWIWLVWL 458


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -3

Query: 462  PFVLGRFNFLVQPSSQFWSEFHVSHIH 382
            P + G  ++L +    FW+E    ++H
Sbjct: 1179 PLIRGEVHYLNRNEETFWNELIEQYLH 1205



 Score = 21.4 bits (43), Expect = 6.3
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +2

Query: 368 HCWSWCMWL 394
           H W W +WL
Sbjct: 450 HAWIWLVWL 458


>AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.
          Length = 46

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 285 RTRHTSFRVEELEPFF 238
           RT  TS+++EELE  F
Sbjct: 1   RTTFTSYQLEELEKAF 16


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +2

Query: 368 HCWSWCMWL 394
           H W W +WL
Sbjct: 217 HAWIWLVWL 225


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 352 IRAPLHRFPCCTGMLPDPHQKCKDP 278
           I  P HRF    G++ DP    +DP
Sbjct: 373 IHDPDHRFLEPFGVMADPAVDLRDP 397


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = +1

Query: 346 HEYYSGLSLLVMVYVAHVKFGPKLAAWLDKEVEATENEWNEG 471
           + YYS +  L    ++H +FG  L     K  + +   +N G
Sbjct: 256 YPYYSNMDYLSSSTMSHSQFGNGLETSWGKSRDESSWFYNSG 297


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 564 QEGERAPAARGRLQGEA 614
           +E ERAPA   R  G+A
Sbjct: 271 EEAERAPAPAVRAAGDA 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,079
Number of Sequences: 336
Number of extensions: 3252
Number of successful extensions: 19
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)