Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10f13r
(727 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0485 - 8808139-8808618 39 0.005
03_02_0484 + 8805053-8805538 39 0.005
03_02_0483 - 8804021-8804485 39 0.005
03_02_0478 + 8775892-8776377 37 0.014
02_02_0077 - 6586638-6587165 37 0.014
12_01_0061 + 514798-515967 37 0.019
04_04_0017 + 22176759-22177406 36 0.025
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 36 0.043
01_01_0229 - 1943473-1943922 35 0.057
01_01_0231 + 1951047-1951499 35 0.076
11_02_0041 - 7669692-7670312 34 0.13
02_05_0494 + 29486960-29487454 33 0.17
01_01_0227 + 1933247-1933699 33 0.31
01_01_0599 - 4448290-4448790 31 0.70
01_05_0523 - 22915390-22915901,22916496-22916619,22916708-229168... 31 0.93
02_05_0444 - 29073740-29073844,29074417-29074725,29077910-290779... 30 1.6
02_05_0308 - 27754340-27754634,27755591-27755696,27755781-277558... 30 1.6
07_01_0628 - 4691991-4692806,4694291-4694293,4694527-4694637 29 2.8
05_03_0202 - 9874205-9874762 29 3.8
03_05_0865 - 28365430-28367640 29 3.8
03_04_0159 + 17832666-17832938,17833634-17833873 29 3.8
01_02_0042 - 10513799-10514152,10514252-10514545,10514630-105148... 29 3.8
09_04_0526 + 18332915-18333605,18335044-18335242,18335914-18336751 29 5.0
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 29 5.0
01_01_0228 + 1940149-1940649 29 5.0
12_02_0759 - 22882435-22882731 28 6.6
08_02_0742 - 20630313-20630798 28 6.6
07_03_0725 + 20991640-20992471,20993308-20993418,20993542-209937... 28 6.6
09_02_0014 - 2977053-2977296,2977719-2978098 28 8.7
05_03_0619 + 16274255-16274396,16274775-16274848,16275111-162761... 28 8.7
05_03_0104 - 8426374-8426542,8426656-8426828,8427020-8427103,842... 28 8.7
>03_02_0485 - 8808139-8808618
Length = 159
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = -3
Query: 296 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 183
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 111 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 147
>03_02_0484 + 8805053-8805538
Length = 161
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = -3
Query: 296 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 183
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 113 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 149
>03_02_0483 - 8804021-8804485
Length = 154
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = -3
Query: 296 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 183
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 106 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 142
>03_02_0478 + 8775892-8776377
Length = 161
Score = 37.1 bits (82), Expect = 0.014
Identities = 15/36 (41%), Positives = 27/36 (75%)
Frame = -3
Query: 296 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 189
S +F+RR+ LP+ A PE +++ + +GVLT+T P++
Sbjct: 113 SGKFLRRFRLPDNAKPEQIKASM-ENGVLTVTVPKE 147
>02_02_0077 - 6586638-6587165
Length = 175
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = -3
Query: 290 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTG 138
+F+RR+ LPE A + V + DGVLT+T +K P K R V + G
Sbjct: 117 KFMRRFPLPESADLDGVRAEYK-DGVLTVTVDKKPPPEPKKPRVVEVKVAG 166
>12_01_0061 + 514798-515967
Length = 389
Score = 36.7 bits (81), Expect = 0.019
Identities = 23/51 (45%), Positives = 27/51 (52%)
Frame = +1
Query: 94 SWVPSLWSLISLRTGPVCAMGTFRSPLTASGTFLGAVMVRTPSDDSRDSTV 246
SW PS +LISL +G CA FRS + A+ FL SDD D TV
Sbjct: 295 SWSPSKLNLISLGSGRFCAAKIFRSNMPAAAAFL------DDSDDDDDYTV 339
>04_04_0017 + 22176759-22177406
Length = 215
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = -3
Query: 290 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTG 138
+F R+ LP+ A +++ + L + GVLT+ + PD +KG R V IA G
Sbjct: 141 RFWRQLRLPDNADLDSIAASLDN-GVLTVRFRKLAPDQIKGPRVVGIASAG 190
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 35.5 bits (78), Expect = 0.043
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = -3
Query: 296 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 192
S QF+RR+ LPE A + V++ L +GVLT+T P+
Sbjct: 102 SGQFMRRFRLPENAKVDQVKAGL-ENGVLTVTVPK 135
>01_01_0229 - 1943473-1943922
Length = 149
Score = 35.1 bits (77), Expect = 0.057
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = -3
Query: 296 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 192
S QF+RR+ LPE A + V++ + +GVLT+T P+
Sbjct: 101 SGQFMRRFRLPENAKVDQVKASM-ENGVLTVTVPK 134
>01_01_0231 + 1951047-1951499
Length = 150
Score = 34.7 bits (76), Expect = 0.076
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = -3
Query: 296 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 192
S QF+RR+ LPE A + V++ + +GVLT+T P+
Sbjct: 102 SGQFMRRFRLPENAKVDQVKAGM-ENGVLTVTVPK 135
>11_02_0041 - 7669692-7670312
Length = 206
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = -3
Query: 290 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 183
+F RR+ +P GA V +RL DGVLT+T P KVP
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVP-KVP 174
>02_05_0494 + 29486960-29487454
Length = 164
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = -3
Query: 293 RQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 189
R V ++ LPE AA + +R++ DGVLT+T P++
Sbjct: 106 RAAVTQFRLPEDAAADEASARMA-DGVLTVTVPKR 139
>01_01_0227 + 1933247-1933699
Length = 150
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3
Query: 296 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 189
S +F RR+ LP GA + V + + +GVLT+T P++
Sbjct: 102 SGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKE 136
>01_01_0599 - 4448290-4448790
Length = 166
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = -3
Query: 290 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 150
+F+R++ LP+ A + + S + DGVLT+T + P K + + +
Sbjct: 118 KFMRKFVLPDNADVDKI-SAVCQDGVLTVTVEKLPPPEPKKPKTIEV 163
>01_05_0523 -
22915390-22915901,22916496-22916619,22916708-22916844,
22917383-22917518,22917614-22917951,22919426-22919663
Length = 494
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 201 RAEEGTRRRQGRAKGAHRTDRSRSQGDQGPERG 103
R EEG RRR+G+ KGA + + D P G
Sbjct: 8 REEEGRRRRKGKGKGAGEMVLQQEEEDAAPAMG 40
>02_05_0444 -
29073740-29073844,29074417-29074725,29077910-29077981,
29078541-29078633,29078825-29078982,29079247-29079415,
29080204-29081241,29081632-29081759,29081926-29081985,
29082033-29083077
Length = 1058
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 171 GRAKGAHRTDRSRSQGDQGPERGNPGC 91
GR R R + QG++G ERG GC
Sbjct: 73 GRTTTTRRRRRRKQQGEEGEERGERGC 99
>02_05_0308 -
27754340-27754634,27755591-27755696,27755781-27755855,
27756039-27757410
Length = 615
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +1
Query: 361 VFTEISSGEKCCTSRLTWNLSLSAFMLEPRSRD 459
+F ++S GE+C ++ T+N+ +SA + R+ D
Sbjct: 401 LFEKMSKGEECLPNQDTYNIIISAMFMRKRAED 433
>07_01_0628 - 4691991-4692806,4694291-4694293,4694527-4694637
Length = 309
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -1
Query: 268 CLKARRLRLWNRDCHQTGFSPSPRRGRYPTPSR 170
C K R W R+C + R GRY PSR
Sbjct: 128 CFKCGRAGHWARECPYSSGGGGGRTGRYSPPSR 160
>05_03_0202 - 9874205-9874762
Length = 185
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -2
Query: 198 AEEGTRRRQGRAKGAHRTDRSRSQGDQG 115
AEE RRQ RA G HR R +G G
Sbjct: 107 AEEREGRRQERASGGHRAKRRAGRGGGG 134
>03_05_0865 - 28365430-28367640
Length = 736
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 192 EGTRRRQGRAKGAHRTDRSRSQGDQGPERGN 100
+ +RR + R +G DR R +GD+ ERG+
Sbjct: 114 DSSRRDRDRERGDRDRDRDRERGDRDRERGD 144
>03_04_0159 + 17832666-17832938,17833634-17833873
Length = 170
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = -2
Query: 216 GSHHHRAEEGTRRRQGRAKGAHRTDRSRSQ-----GDQGPER 106
G H R R R+GR +G R RS + GDQGP R
Sbjct: 7 GKHPKRGRGRPRGRRGRGRGRGRGGRSLASPAAGPGDQGPRR 48
>01_02_0042 -
10513799-10514152,10514252-10514545,10514630-10514893,
10515019-10515285,10515363-10516207,10516311-10516584,
10516694-10517219,10518009-10518247,10518370-10518591,
10518689-10518864,10518962-10519358
Length = 1285
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -2
Query: 231 TVIRRGSHHH--RAEEGTRRRQGRAKGAHRTDRSRSQGDQGPERG 103
T++ +G HH + EG + + + A+R D+S +GD G G
Sbjct: 607 TLVEKGPHHELLKDPEGAYSQLIKLQEANRQDKSDRKGDSGARSG 651
>09_04_0526 + 18332915-18333605,18335044-18335242,18335914-18336751
Length = 575
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = -1
Query: 280 DVTRCLKARRLR-----LWNRDCHQTGFSPSPRRGRYPTPSRESERCPSHRPVP 134
D+TR +ARR R L + H F P P YP P S+ +HR VP
Sbjct: 387 DLTRLKRARRNRINASSLGIQAQHDMPFHPRPLVPAYPQPHFPSQVNAAHRQVP 440
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 222 RRGSHHHRAEEGTRRRQGRAKGAHRTDRSRSQ 127
R+GS+H + E +++R +K A DRS ++
Sbjct: 448 RKGSNHGKGESKSKKRSSTSKDASSPDRSSAE 479
>01_01_0228 + 1940149-1940649
Length = 166
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -3
Query: 287 FVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGER 162
+V R LP G E V + VL IT R V KG+R
Sbjct: 52 YVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQR 93
>12_02_0759 - 22882435-22882731
Length = 98
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -2
Query: 222 RRGSHHHRAEEGTRRRQGRAKGAHRTDRSRSQGDQGPERG 103
R HH E G RRR R G DR ++GP+ G
Sbjct: 41 RTHERHHLVERGQRRRGDRGAGVLGADRV----EEGPQHG 76
>08_02_0742 - 20630313-20630798
Length = 161
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -2
Query: 213 SHHHRAEEGTRRRQGRAKGAHRTDRSRSQGDQGPERGNPGCR 88
S H E RRR+GR + A D R+ + RG CR
Sbjct: 64 SSHGEEEAARRRRRGRGEEADGVDPVRAVTTKRQRRGGRRCR 105
>07_03_0725 +
20991640-20992471,20993308-20993418,20993542-20993739,
20993860-20993891,20993943-20994153,20994806-20995043,
20995507-20995657,20996171-20996533
Length = 711
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -3
Query: 566 DQDFGLALTPNDMLAAVACPVLSEDYFRPWRQLAAASRD 450
D+ FGLAL DM A AC F+ R L RD
Sbjct: 75 DRVFGLALCRGDMRDAAACAGCVSGAFQRLRALCGRDRD 113
>09_02_0014 - 2977053-2977296,2977719-2978098
Length = 207
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 198 AEEGTRRRQGRAKGAHRTDRSRSQGDQGPERGNPGCRK 85
A++ RR++G++K R ++ +S PE CRK
Sbjct: 158 ADDAVRRKEGKSKA--RDEKKKSTDRDAPELSKKRCRK 193
>05_03_0619 +
16274255-16274396,16274775-16274848,16275111-16276139,
16276484-16276702,16277228-16277250,16277482-16277606,
16279480-16279670,16280202-16280360,16281359-16281598
Length = 733
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Frame = +2
Query: 239 PQSQAPRLQAARNVGRTA-LKYTRARLSSLRACLPP--RCTHRQSSPKSLPARSAARPD* 409
P+ Q P + R ++ RA + + C+ P R L A +A+
Sbjct: 598 PRKQMPEFETTRYFNLAGFVEQLRALAAEVGYCITPEYRVVRNFEDKGVLEALWSAKSSP 657
Query: 410 LGTCPCRPL 436
GTCP RPL
Sbjct: 658 YGTCPSRPL 666
>05_03_0104 -
8426374-8426542,8426656-8426828,8427020-8427103,
8427110-8427205,8427530-8427616,8428639-8428767,
8428922-8429098,8429185-8429295,8429642-8429761,
8430767-8432427,8432485-8432867,8433707-8434470,
8434532-8434813,8436158-8436493
Length = 1523
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -2
Query: 183 RRRQGRAKGAHRTDRSRSQGDQGPERG 103
RR G+A R R+QGD G ERG
Sbjct: 10 RRSAGKAAPGAGRQRRRAQGDNGVERG 36
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,289,061
Number of Sequences: 37544
Number of extensions: 488092
Number of successful extensions: 1916
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1910
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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