Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10f13f
(595 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0485 - 8808139-8808618 39 0.003
03_02_0484 + 8805053-8805538 39 0.003
03_02_0483 - 8804021-8804485 39 0.003
03_02_0478 + 8775892-8776377 37 0.011
02_02_0077 - 6586638-6587165 37 0.011
04_04_0017 + 22176759-22177406 36 0.018
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 36 0.032
01_01_0229 - 1943473-1943922 35 0.043
01_01_0231 + 1951047-1951499 35 0.056
11_02_0041 - 7669692-7670312 34 0.098
02_05_0494 + 29486960-29487454 33 0.13
01_01_0227 + 1933247-1933699 33 0.23
01_01_0599 - 4448290-4448790 31 0.52
02_05_0308 - 27754340-27754634,27755591-27755696,27755781-277558... 30 1.2
07_01_0628 - 4691991-4692806,4694291-4694293,4694527-4694637 29 2.1
09_04_0526 + 18332915-18333605,18335044-18335242,18335914-18336751 29 3.7
01_01_0228 + 1940149-1940649 29 3.7
07_03_0725 + 20991640-20992471,20993308-20993418,20993542-209937... 28 4.9
05_03_0619 + 16274255-16274396,16274775-16274848,16275111-162761... 28 6.5
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 28 6.5
11_06_0141 + 20559828-20559986,20560074-20560281,20560375-205604... 27 8.5
05_03_0628 - 16367841-16369259 27 8.5
04_04_1068 + 30552935-30553234,30553424-30553623,30553738-30554122 27 8.5
01_05_0523 - 22915390-22915901,22916496-22916619,22916708-229168... 27 8.5
>03_02_0485 - 8808139-8808618
Length = 159
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +3
Query: 432 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 545
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 111 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 147
>03_02_0484 + 8805053-8805538
Length = 161
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +3
Query: 432 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 545
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 113 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 149
>03_02_0483 - 8804021-8804485
Length = 154
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +3
Query: 432 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 545
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 106 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 142
>03_02_0478 + 8775892-8776377
Length = 161
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/36 (41%), Positives = 27/36 (75%)
Frame = +3
Query: 432 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 539
S +F+RR+ LP+ A PE +++ + +GVLT+T P++
Sbjct: 113 SGKFLRRFRLPDNAKPEQIKASM-ENGVLTVTVPKE 147
>02_02_0077 - 6586638-6587165
Length = 175
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 438 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTG 590
+F+RR+ LPE A + V + DGVLT+T +K P K R V + G
Sbjct: 117 KFMRRFPLPESADLDGVRAEYK-DGVLTVTVDKKPPPEPKKPRVVEVKVAG 166
>04_04_0017 + 22176759-22177406
Length = 215
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +3
Query: 438 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTG 590
+F R+ LP+ A +++ + L + GVLT+ + PD +KG R V IA G
Sbjct: 141 RFWRQLRLPDNADLDSIAASLDN-GVLTVRFRKLAPDQIKGPRVVGIASAG 190
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 35.5 bits (78), Expect = 0.032
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +3
Query: 432 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 536
S QF+RR+ LPE A + V++ L +GVLT+T P+
Sbjct: 102 SGQFMRRFRLPENAKVDQVKAGL-ENGVLTVTVPK 135
>01_01_0229 - 1943473-1943922
Length = 149
Score = 35.1 bits (77), Expect = 0.043
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 432 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 536
S QF+RR+ LPE A + V++ + +GVLT+T P+
Sbjct: 101 SGQFMRRFRLPENAKVDQVKASM-ENGVLTVTVPK 134
>01_01_0231 + 1951047-1951499
Length = 150
Score = 34.7 bits (76), Expect = 0.056
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +3
Query: 432 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 536
S QF+RR+ LPE A + V++ + +GVLT+T P+
Sbjct: 102 SGQFMRRFRLPENAKVDQVKAGM-ENGVLTVTVPK 135
>11_02_0041 - 7669692-7670312
Length = 206
Score = 33.9 bits (74), Expect = 0.098
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +3
Query: 438 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 545
+F RR+ +P GA V +RL DGVLT+T P KVP
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVP-KVP 174
>02_05_0494 + 29486960-29487454
Length = 164
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 435 RQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 539
R V ++ LPE AA + +R++ DGVLT+T P++
Sbjct: 106 RAAVTQFRLPEDAAADEASARMA-DGVLTVTVPKR 139
>01_01_0227 + 1933247-1933699
Length = 150
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 432 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 539
S +F RR+ LP GA + V + + +GVLT+T P++
Sbjct: 102 SGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKE 136
>01_01_0599 - 4448290-4448790
Length = 166
Score = 31.5 bits (68), Expect = 0.52
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 438 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 578
+F+R++ LP+ A + + S + DGVLT+T + P K + + +
Sbjct: 118 KFMRKFVLPDNADVDKI-SAVCQDGVLTVTVEKLPPPEPKKPKTIEV 163
>02_05_0308 -
27754340-27754634,27755591-27755696,27755781-27755855,
27756039-27757410
Length = 615
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -1
Query: 367 VFTEISSGEKCCTSRLTWNLSLSAFMLEPRSRD 269
+F ++S GE+C ++ T+N+ +SA + R+ D
Sbjct: 401 LFEKMSKGEECLPNQDTYNIIISAMFMRKRAED 433
>07_01_0628 - 4691991-4692806,4694291-4694293,4694527-4694637
Length = 309
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 460 CLKARRLRLWNRDCHQTGFSPSPRRGRYPTPSR 558
C K R W R+C + R GRY PSR
Sbjct: 128 CFKCGRAGHWARECPYSSGGGGGRTGRYSPPSR 160
>09_04_0526 + 18332915-18333605,18335044-18335242,18335914-18336751
Length = 575
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +1
Query: 448 DVTRCLKARRLR-----LWNRDCHQTGFSPSPRRGRYPTPSRESERCPSHRPVP 594
D+TR +ARR R L + H F P P YP P S+ +HR VP
Sbjct: 387 DLTRLKRARRNRINASSLGIQAQHDMPFHPRPLVPAYPQPHFPSQVNAAHRQVP 440
>01_01_0228 + 1940149-1940649
Length = 166
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +3
Query: 441 FVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGER 566
+V R LP G E V + VL IT R V KG+R
Sbjct: 52 YVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQR 93
>07_03_0725 +
20991640-20992471,20993308-20993418,20993542-20993739,
20993860-20993891,20993943-20994153,20994806-20995043,
20995507-20995657,20996171-20996533
Length = 711
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 162 DQDFGLALTPNDMLAAVACPVLSEDYFRPWRQLAAASRD 278
D+ FGLAL DM A AC F+ R L RD
Sbjct: 75 DRVFGLALCRGDMRDAAACAGCVSGAFQRLRALCGRDRD 113
>05_03_0619 +
16274255-16274396,16274775-16274848,16275111-16276139,
16276484-16276702,16277228-16277250,16277482-16277606,
16279480-16279670,16280202-16280360,16281359-16281598
Length = 733
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Frame = -2
Query: 489 PQSQAPRLQAARNVGRTA-LKYTRARLSSLRACLPP--RCTHRQSSPKSLPARSAARPD* 319
P+ Q P + R ++ RA + + C+ P R L A +A+
Sbjct: 598 PRKQMPEFETTRYFNLAGFVEQLRALAAEVGYCITPEYRVVRNFEDKGVLEALWSAKSSP 657
Query: 318 LGTCPCRPL 292
GTCP RPL
Sbjct: 658 YGTCPSRPL 666
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 506 RRGSHHHRAEEGTRRRQGRAKGAHRTDRS 592
R+GS+H + E +++R +K A DRS
Sbjct: 448 RKGSNHGKGESKSKKRSSTSKDASSPDRS 476
>11_06_0141 +
20559828-20559986,20560074-20560281,20560375-20560433,
20560532-20560590,20560809-20560886,20560974-20561073,
20561174-20561245,20561327-20561434,20561677-20561730,
20562847-20563296
Length = 448
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 456 ALPEGAAPETVESRLSSDGVLTITAPRKVPDAV 554
A P A+PET ES ++ L T P K+ D V
Sbjct: 151 APPNDASPETQESNENTTNALEQTLPEKMEDDV 183
>05_03_0628 - 16367841-16369259
Length = 472
Score = 27.5 bits (58), Expect = 8.5
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = -1
Query: 376 PSAVFTEISSGEKCCTSRLTWNLSLSAFMLEPRSRDAAASCLHGLK*SSESTGQATAASM 197
P F +SSG+ T S S+F S++++++ L GLK T ++ S
Sbjct: 251 PLFSFKNLSSGQNAFTGLAGTGFSGSSFSFGSGSKESSSAPLFGLK-----TDGSSFPSF 305
Query: 196 SFGVSANPKS 167
S G S N S
Sbjct: 306 SIGASNNGSS 315
>04_04_1068 + 30552935-30553234,30553424-30553623,30553738-30554122
Length = 294
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 371 GSLHRNLFRREVLHVQIDLELVLV-GLYAGTEVTRCSRELSPW 246
GS R+ R + L+VQID+E+ L+ G AGT T + PW
Sbjct: 67 GSCFRS--REKYLYVQIDVEIKLIEGDSAGTVCTIYTISEGPW 107
>01_05_0523 -
22915390-22915901,22916496-22916619,22916708-22916844,
22917383-22917518,22917614-22917951,22919426-22919663
Length = 494
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 527 RAEEGTRRRQGRAKGA 574
R EEG RRR+G+ KGA
Sbjct: 8 REEEGRRRRKGKGKGA 23
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,398,820
Number of Sequences: 37544
Number of extensions: 387275
Number of successful extensions: 1574
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1568
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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