Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10f13f
(595 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 62 2e-10
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 62 3e-10
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 62 3e-10
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 62 4e-10
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 58 5e-09
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 58 6e-09
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 58 6e-09
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 58 6e-09
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 58 6e-09
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 58 6e-09
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 58 6e-09
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 57 8e-09
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 57 1e-08
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 57 1e-08
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 57 1e-08
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 56 2e-08
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 56 2e-08
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 56 2e-08
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 55 3e-08
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 54 1e-07
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 54 1e-07
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 54 1e-07
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 54 1e-07
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 52 2e-07
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 52 2e-07
Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical pr... 52 4e-07
EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock pr... 52 4e-07
Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock prot... 48 5e-06
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 44 6e-05
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 37 0.009
M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein. 30 1.4
Z70212-4|CAA94164.1| 322|Caenorhabditis elegans Hypothetical pr... 28 4.4
U41545-4|AAK39134.1| 665|Caenorhabditis elegans Temporarily ass... 28 5.8
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 28 5.8
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 28 5.8
L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleo... 28 5.8
AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc fi... 28 5.8
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 27 7.6
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 62.5 bits (145), Expect = 2e-10
Identities = 31/79 (39%), Positives = 47/79 (59%)
Frame = +3
Query: 303 KDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPE 482
K+KF+V LDVQ F+P+EI VK + +++ ++R+ R Y LP+
Sbjct: 31 KEKFEVGLDVQFFTPKEIEVKVSGQELLIHCRHETRSDNHGTVAREINRAYKLPDDVDVS 90
Query: 483 TVESRLSSDGVLTITAPRK 539
TV+S L++ GVLTITA +K
Sbjct: 91 TVKSHLATRGVLTITASKK 109
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 62.1 bits (144), Expect = 3e-10
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +3
Query: 309 KFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETV 488
++ V++DV F PEE+ V D +++ + R FVR+Y LP G PE +
Sbjct: 56 EYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTGVRPEQI 115
Query: 489 ESRLSSDGVLTI 524
+S LS++GVLT+
Sbjct: 116 KSELSNNGVLTV 127
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 62.1 bits (144), Expect = 3e-10
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +3
Query: 309 KFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETV 488
++ V++DV F PEE+ V D +++ + R FVR+Y LP G PE +
Sbjct: 55 EYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTGVRPEQI 114
Query: 489 ESRLSSDGVLTI 524
+S LS++GVLT+
Sbjct: 115 KSELSNNGVLTV 126
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 61.7 bits (143), Expect = 4e-10
Identities = 36/103 (34%), Positives = 51/103 (49%)
Frame = +3
Query: 270 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVR 449
S ++G I D+ KF V LDV HF PE + +K DG + Y+ R F +
Sbjct: 41 SDNIGEQIVNDESKFSVQLDVSHFKPENLKIK-LDGRELKIEGIQETKSEHGYLKRSFSK 99
Query: 450 RYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 578
LPE A +V+S +S++G L I AP+K R +PI
Sbjct: 100 MILLPEDADLPSVKSAISNEGKLQIEAPKK----TNSSRSIPI 138
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 58.0 bits (134), Expect = 5e-09
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Frame = +3
Query: 276 DLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRY 455
D+ S++ D +F V++D F PEEI VKT D +++ + FVR+Y
Sbjct: 102 DVNSNVVNDDRRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMYFVRKY 161
Query: 456 ALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKG-ERKVPIAQTG 590
LP +++S + + G L + A + A++G ER +PI G
Sbjct: 162 QLPRDVDFNSIQSSIDAKGRLQVEAGKFNNMALQGRERMIPIEGAG 207
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 57.6 bits (133), Expect = 6e-09
Identities = 30/75 (40%), Positives = 39/75 (52%)
Frame = +3
Query: 306 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPET 485
+KF+V LD F P +I VK I++ ++R+ R Y LPE P T
Sbjct: 32 EKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDNRPTEYGIVNREVHRTYKLPEDVDPST 91
Query: 486 VESRLSSDGVLTITA 530
V S L+S GVLTITA
Sbjct: 92 VRSHLNSSGVLTITA 106
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 57.6 bits (133), Expect = 6e-09
Identities = 37/114 (32%), Positives = 54/114 (47%)
Frame = +3
Query: 243 RPWRQLAAASRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXX 422
R + + S S I + KF +NL+V F PE++ + DG+ +
Sbjct: 27 RQFTPVCRGSPSESSEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEH 85
Query: 423 XYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 584
Y + F R LPE V S LS DG L+I AP+K +A++G R +PI Q
Sbjct: 86 GYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKK--EAIQG-RSIPIQQ 136
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 57.6 bits (133), Expect = 6e-09
Identities = 37/114 (32%), Positives = 54/114 (47%)
Frame = +3
Query: 243 RPWRQLAAASRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXX 422
R + + S S I + KF +NL+V F PE++ + DG+ +
Sbjct: 27 RQFTPVCRGSPSESSEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEH 85
Query: 423 XYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 584
Y + F R LPE V S LS DG L+I AP+K +A++G R +PI Q
Sbjct: 86 GYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKK--EAIQG-RSIPIQQ 136
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 57.6 bits (133), Expect = 6e-09
Identities = 37/114 (32%), Positives = 54/114 (47%)
Frame = +3
Query: 243 RPWRQLAAASRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXX 422
R + + S S I + KF +NL+V F PE++ + DG+ +
Sbjct: 27 RQFTPVCRGSPSESSEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEH 85
Query: 423 XYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 584
Y + F R LPE V S LS DG L+I AP+K +A++G R +PI Q
Sbjct: 86 GYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKK--EAIQG-RSIPIQQ 136
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 57.6 bits (133), Expect = 6e-09
Identities = 34/103 (33%), Positives = 50/103 (48%)
Frame = +3
Query: 270 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVR 449
S ++G I D+ KF V LDV HF PE++ ++ DG + Y R F +
Sbjct: 41 SDNIGEQIVNDESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSK 99
Query: 450 RYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 578
LPE +V+S +S++G L I AP+K R +PI
Sbjct: 100 MILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 138
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 57.6 bits (133), Expect = 6e-09
Identities = 35/103 (33%), Positives = 51/103 (49%)
Frame = +3
Query: 270 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVR 449
S ++G + D+ KF V LDV HF PE + +K DG + Y+ R F +
Sbjct: 41 SDNIGEIVN-DESKFSVQLDVSHFKPENLKIKL-DGRELKIEGIQETKSEHGYLKRSFSK 98
Query: 450 RYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 578
LPE A +V+S +S++G L I AP+K R +PI
Sbjct: 99 MILLPEDADLPSVKSAISNEGKLQIEAPKK----TNSSRSIPI 137
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 57.2 bits (132), Expect = 8e-09
Identities = 33/93 (35%), Positives = 46/93 (49%)
Frame = +3
Query: 300 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 479
D+ KF V LDV HF PE + +K DG + Y+ R F + LPE A
Sbjct: 4 DESKFSVQLDVSHFKPENLKIKL-DGRELKIEGIQETKSEHGYLKRSFSKMILLPEDADL 62
Query: 480 ETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 578
+V+S +S++G L I AP+K R +PI
Sbjct: 63 PSVKSAISNEGKLQIEAPKK----TNSSRSIPI 91
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +3
Query: 294 KADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 473
++D ++ DV ++ PEE++VKT D ++V + R++ + + LP G
Sbjct: 22 ESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGT 80
Query: 474 APETVESRLSSDGVLTITAP 533
PE + S LS+DGVLT+ AP
Sbjct: 81 NPEQISSTLSTDGVLTVEAP 100
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +3
Query: 294 KADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 473
++D ++ DV ++ PEE++VKT D ++V + R++ + + LP G
Sbjct: 119 ESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGT 177
Query: 474 APETVESRLSSDGVLTITAP 533
PE + S LS+DGVLT+ AP
Sbjct: 178 NPEQISSTLSTDGVLTVEAP 197
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +3
Query: 294 KADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 473
++D ++ DV ++ PEE++VKT D ++V + R++ + + LP G
Sbjct: 133 ESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGT 191
Query: 474 APETVESRLSSDGVLTITAP 533
PE + S LS+DGVLT+ AP
Sbjct: 192 NPEQISSTLSTDGVLTVEAP 211
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 56.0 bits (129), Expect = 2e-08
Identities = 38/114 (33%), Positives = 53/114 (46%)
Frame = +3
Query: 243 RPWRQLAAASRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXX 422
R + + S S I + KF +NL+V F PE++ + DG +
Sbjct: 27 RQFAPVCRISPSESSEIVNNDQKFAINLNVSQFKPEDLKINL-DGRTLSIQGEQELKTDH 85
Query: 423 XYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 584
Y + F R LPE V S LS DG L+I AP+K +AV+G R +PI Q
Sbjct: 86 GYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKK--EAVQG-RSIPIQQ 136
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 56.0 bits (129), Expect = 2e-08
Identities = 32/98 (32%), Positives = 47/98 (47%)
Frame = +3
Query: 285 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 464
+SI+ F LDV + + + V D I+V I F RR+ LP
Sbjct: 72 TSIRVTNTSFHAILDVSKYDADSLKVTVVDNNIIVEGSHGEKEDTYGTIESTFKRRFPLP 131
Query: 465 EGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 578
+ APE+V+S+L++DG LTI A P +G R + I
Sbjct: 132 KAVAPESVQSQLTADGHLTIDAKAPEPKQ-EGARPIQI 168
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 56.0 bits (129), Expect = 2e-08
Identities = 38/114 (33%), Positives = 53/114 (46%)
Frame = +3
Query: 243 RPWRQLAAASRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXX 422
R + + S S I + KF +NL+V F PE++ + DG +
Sbjct: 27 RQFAPVCRISPSESSEIVNNDQKFAINLNVSQFKPEDLKINL-DGRTLSIQGEQELKTDH 85
Query: 423 XYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 584
Y + F R LPE V S LS DG L+I AP+K +AV+G R +PI Q
Sbjct: 86 GYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKK--EAVQG-RSIPIQQ 136
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 55.2 bits (127), Expect = 3e-08
Identities = 33/92 (35%), Positives = 47/92 (51%)
Frame = +3
Query: 309 KFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETV 488
KF +NL+V F PE++ + DG+ + Y + F R LPE V
Sbjct: 50 KFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLPEDVDVGAV 108
Query: 489 ESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 584
S LS DG L+I AP+K +A++G R +PI Q
Sbjct: 109 ASNLSEDGKLSIEAPKK--EAIQG-RSIPIQQ 137
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/103 (32%), Positives = 50/103 (48%)
Frame = +3
Query: 270 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVR 449
S ++G + D+ KF V LDV HF PE++ ++ DG + Y R F +
Sbjct: 33 SDNIGEIVN-DESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSK 90
Query: 450 RYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 578
LPE +V+S +S++G L I AP+K R +PI
Sbjct: 91 MILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 129
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/103 (32%), Positives = 50/103 (48%)
Frame = +3
Query: 270 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVR 449
S ++G + D+ KF V LDV HF PE++ ++ DG + Y R F +
Sbjct: 41 SDNIGEIVN-DESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSK 98
Query: 450 RYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 578
LPE +V+S +S++G L I AP+K R +PI
Sbjct: 99 MILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 137
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/103 (32%), Positives = 50/103 (48%)
Frame = +3
Query: 270 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVR 449
S ++G + D+ KF V LDV HF PE++ ++ DG + Y R F +
Sbjct: 41 SDNIGEIVN-DESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSK 98
Query: 450 RYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 578
LPE +V+S +S++G L I AP+K R +PI
Sbjct: 99 MILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 137
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/103 (32%), Positives = 50/103 (48%)
Frame = +3
Query: 270 SRDLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVR 449
S ++G + D+ KF V LDV HF PE++ ++ DG + Y R F +
Sbjct: 41 SDNIGEIVN-DESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSK 98
Query: 450 RYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 578
LPE +V+S +S++G L I AP+K R +PI
Sbjct: 99 MILLPEDVDLTSVKSAISNEGKLQIEAPKK----TNSSRSIPI 137
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/79 (31%), Positives = 40/79 (50%)
Frame = +3
Query: 303 KDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPE 482
+D F+V L+ +F P EI VK ++ + I+R R Y LP+G P
Sbjct: 30 EDHFEVGLEAHNFLPNEIDVKNIGEFLEIHMAHTTKDDKFGSITRSITRCYRLPKGTDPA 89
Query: 483 TVESRLSSDGVLTITAPRK 539
T++S+L G+L I+ +K
Sbjct: 90 TIKSKLDGSGILHISGNKK 108
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = +3
Query: 312 FQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETVE 491
F + +DV HF PEEI V D + + + R F R+Y++P+ +T+
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSIPDDVHLDTIR 163
Query: 492 SRLSSDGVLTITAPRK 539
S L++ GVL I RK
Sbjct: 164 SHLTNSGVLIINGSRK 179
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = +3
Query: 312 FQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETVE 491
F + +DV HF PEEI V D + + + R F R+Y++P+ +T+
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSIPDDVHLDTIR 163
Query: 492 SRLSSDGVLTITAPRK 539
S L++ GVL I RK
Sbjct: 164 SHLTNSGVLIINGSRK 179
>Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical
protein T22A3.2b protein.
Length = 112
Score = 51.6 bits (118), Expect = 4e-07
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +3
Query: 306 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXX---YISRQFVRRYALPEGAA 476
+KF+V LD F P +I VK I++ ++R+ R Y LPE
Sbjct: 32 EKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEYGIVNREVHRTYKLPEDVD 91
Query: 477 PETVESRLSSDGVLTITA 530
P TV S L+S GVLTITA
Sbjct: 92 PSTVRSHLNSSGVLTITA 109
>EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock
protein 12.1 protein.
Length = 112
Score = 51.6 bits (118), Expect = 4e-07
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +3
Query: 306 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXX---YISRQFVRRYALPEGAA 476
+KF+V LD F P +I VK I++ ++R+ R Y LPE
Sbjct: 32 EKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEYGIVNREVHRTYKLPEDVD 91
Query: 477 PETVESRLSSDGVLTITA 530
P TV S L+S GVLTITA
Sbjct: 92 PSTVRSHLNSSGVLTITA 109
>Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical
protein F38E11.2 protein.
Length = 110
Score = 48.0 bits (109), Expect = 5e-06
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +3
Query: 300 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 479
D D F+V L+ +F P+EI VK + + +SR R Y LP+
Sbjct: 30 DDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCYKLPKNVDM 89
Query: 480 ETVESRLSSDGVLTITA 530
+T++S L S G+L I A
Sbjct: 90 KTIKSNLDSHGILHIEA 106
>U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock protein
12.6 protein.
Length = 110
Score = 48.0 bits (109), Expect = 5e-06
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +3
Query: 300 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 479
D D F+V L+ +F P+EI VK + + +SR R Y LP+
Sbjct: 30 DDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCYKLPKNVDM 89
Query: 480 ETVESRLSSDGVLTITA 530
+T++S L S G+L I A
Sbjct: 90 KTIKSNLDSHGILHIEA 106
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 46.8 bits (106), Expect = 1e-05
Identities = 34/100 (34%), Positives = 47/100 (47%)
Frame = +3
Query: 285 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 464
S I DKF VNL+V +F PEE+ V +G + + F R LP
Sbjct: 43 SEIMNSNDKFAVNLNVSNFKPEELKV-NLEGRQLSIQGEHDVENEHGASRKSFSRMILLP 101
Query: 465 EGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQ 584
E +V + LS+DG L I AP+ + V G R VP+ +
Sbjct: 102 EDVDITSVATNLSNDGKLCIEAPKL--EGVCG-RSVPVKE 138
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 44.4 bits (100), Expect = 6e-05
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +3
Query: 285 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 464
+ ++ KF V LDV F PEE+ V +G+++ + R F R++ LP
Sbjct: 44 NEVENTAQKFCVKLDVAAFKPEELKVNL-EGHVLTIEGHHEVKTEHGFSKRSFTRQFTLP 102
Query: 465 EGAAPETVESRLSSDGVLTITAPR 536
+ + + ++ +G +TI AP+
Sbjct: 103 KDVDLAHIHTVINKEGQMTIDAPK 126
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 37.1 bits (82), Expect = 0.009
Identities = 22/87 (25%), Positives = 35/87 (40%)
Frame = +3
Query: 276 DLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRY 455
D + I +KF VNL+V PEE+ + + + ++ + +
Sbjct: 39 DCRNEIVDTHEKFSVNLNVPDVKPEELKINLEGRKLSIKAEHQEIENDNISTTQTYSKSI 98
Query: 456 ALPEGAAPETVESRLSSDGVLTITAPR 536
LPE + S LS DG L I P+
Sbjct: 99 VLPEDVDVTHLSSNLSEDGKLLIEVPK 125
>M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein.
Length = 22
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 300 DKDKFQVNLDVQHFSPEE 353
D+ KF V LDV HF PE+
Sbjct: 5 DESKFSVQLDVSHFKPED 22
>Z70212-4|CAA94164.1| 322|Caenorhabditis elegans Hypothetical
protein R04D3.6 protein.
Length = 322
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 46 TFLCVLPYLFKYNQICLFYHSCWVTG 123
T CVLPY+F Y I Y+ C +TG
Sbjct: 243 TIQCVLPYVF-YIPIYTLYYYCLLTG 267
>U41545-4|AAK39134.1| 665|Caenorhabditis elegans Temporarily
assigned gene nameprotein 52 protein.
Length = 665
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 571 TFRSPLTASGTFLGAVMVRTPSDDSRDS 488
T P T F+G RTP+DD DS
Sbjct: 514 TMTQPYTGLNAFVGTPKSRTPTDDDYDS 541
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 27.9 bits (59), Expect = 5.8
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +1
Query: 295 RPTRTSSKSIWTCSTSRRKRFR*RLPMGTSWWKAST----KRRKTSTGIFQGSSSDVTRC 462
R T T S+S+ + S + R++ R P S + S K R T T SSS ++ C
Sbjct: 933 RDTPTGSRSMRSTSPNDRRKSRETPPGNRSMRRTSPSDGRKSRDTPTASSSMSSSTLSYC 992
Query: 463 LKARRLRLWNRDCHQTGFSPSPRRGRYPTPSRESER 570
K++ + + Q + R + +RE +R
Sbjct: 993 KKSKETPMSYEEIEQQKKAKRQRNCKTREENRERKR 1028
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 27.9 bits (59), Expect = 5.8
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +1
Query: 295 RPTRTSSKSIWTCSTSRRKRFR*RLPMGTSWWKAST----KRRKTSTGIFQGSSSDVTRC 462
R T T S+S+ + S + R++ R P S + S K R T T SSS ++ C
Sbjct: 933 RDTPTGSRSMRSTSPNDRRKSRETPPGNRSMRRTSPSDGRKSRDTPTASSSMSSSTLSYC 992
Query: 463 LKARRLRLWNRDCHQTGFSPSPRRGRYPTPSRESER 570
K++ + + Q + R + +RE +R
Sbjct: 993 KKSKETPMSYEEIEQQKKAKRQRNCKTREENRERKR 1028
>L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleoli
protein 1 protein.
Length = 851
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -3
Query: 176 SKILINKTTGPVVVTNAGPVTQHEW*KRHIWLYLNRYGKTQRKVRLNASQ 27
+++ +N+TTG VVT P Q I +Y N+YG+ RK N Q
Sbjct: 637 NRVAVNRTTGDFVVTERSPTHQ-------IQVY-NQYGQFLRKFGANILQ 678
>AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc
finger protein Ncl-1 protein.
Length = 851
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -3
Query: 176 SKILINKTTGPVVVTNAGPVTQHEW*KRHIWLYLNRYGKTQRKVRLNASQ 27
+++ +N+TTG VVT P Q I +Y N+YG+ RK N Q
Sbjct: 637 NRVAVNRTTGDFVVTERSPTHQ-------IQVY-NQYGQFLRKFGANILQ 678
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 517 SPSPRRGRYPTPSRESER 570
SPSPRR R P+P ++ +R
Sbjct: 355 SPSPRRRRSPSPKKDKKR 372
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 517 SPSPRRGRYPTPSRESER 570
SPSPRR R P+P ++ +R
Sbjct: 355 SPSPRRRRSPSPKKDKKR 372
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 517 SPSPRRGRYPTPSRESER 570
SPSPRR R P+P ++ +R
Sbjct: 286 SPSPRRRRSPSPKKDKKR 303
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,949,809
Number of Sequences: 27780
Number of extensions: 294085
Number of successful extensions: 969
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -