Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10f12r
         (790 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0ZAL3 Cluster: Splicing factor proline-and glutamine-r...    78   2e-13
UniRef50_Q7RMT5 Cluster: Putative uncharacterized protein PY0209...    34   3.5  
UniRef50_Q9U1N0 Cluster: Hrp65 protein; n=3; Chironomus tentans|...    33   6.2  
UniRef50_Q6QN29 Cluster: Cation transport P-ATPase; n=4; Candida...    33   8.2  

>UniRef50_Q0ZAL3 Cluster: Splicing factor proline-and
           glutamine-rich; n=4; Endopterygota|Rep: Splicing factor
           proline-and glutamine-rich - Bombyx mori (Silk moth)
          Length = 641

 Score = 78.2 bits (184), Expect = 2e-13
 Identities = 44/74 (59%), Positives = 44/74 (59%)
 Frame = -3

Query: 737 EMXXXXXXXXXXXXRQQLMRHEEELSXXXXXXXXXXXXXXXENTLFVQAQRLNSMLDRQE 558
           EM            RQQLMRHEEELS               ENTLFVQAQRLNSMLDRQE
Sbjct: 532 EMAERAADERREAERQQLMRHEEELSQRMRLQDDELRRRQQENTLFVQAQRLNSMLDRQE 591

Query: 557 QGMFDQQQPMVSVY 516
           QGMFDQQQPM   Y
Sbjct: 592 QGMFDQQQPMDGGY 605


>UniRef50_Q7RMT5 Cluster: Putative uncharacterized protein PY02093;
           n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY02093 - Plasmodium yoelii yoelii
          Length = 668

 Score = 34.3 bits (75), Expect = 3.5
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +3

Query: 222 NYFFMTLTNIL-NLPVFYIIQNYVYEYSEILYINKQYFKANFV*VTKIFTHFFKF 383
           NY +  L +IL NLP FY   N   +Y E+LY+++   + +   + KI+   F +
Sbjct: 487 NYNYNELMDILYNLPQFYSFGNLKKKYKELLYLHESIKEDDLKKLIKIYPRIFTY 541


>UniRef50_Q9U1N0 Cluster: Hrp65 protein; n=3; Chironomus
           tentans|Rep: Hrp65 protein - Chironomus tentans (Midge)
          Length = 535

 Score = 33.5 bits (73), Expect = 6.2
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = -3

Query: 692 QQLMRHEEELSXXXXXXXXXXXXXXXENTLFVQAQRLNSMLDRQE 558
           QQ+ R ++++                EN+LF+QAQ+L++MLD+QE
Sbjct: 386 QQMRRQQDDMQMRMQRQDEEMRRRQQENSLFMQAQQLSNMLDQQE 430


>UniRef50_Q6QN29 Cluster: Cation transport P-ATPase; n=4; Candidatus
           Phytoplasma|Rep: Cation transport P-ATPase - Aster
           yellows witches'-broom phytoplasma
          Length = 889

 Score = 33.1 bits (72), Expect = 8.2
 Identities = 18/69 (26%), Positives = 37/69 (53%)
 Frame = -3

Query: 458 RKKVIDLVKYAVFPMSAD*LQMVSLKLEKMCKNFSDLNKIGLKILFINI*YFTVLIDVVL 279
           RK   + +KY  F +S++    +S+ L  +C NF  +  I L++LF+++ Y  +   +  
Sbjct: 673 RKTYTNALKYIKFTLSSNFANSLSILLASLCLNFQPM--IVLQVLFLDLIYDLICFAIPF 730

Query: 278 YYIKDW*IQ 252
             + D+ +Q
Sbjct: 731 DNVDDFYLQ 739


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,700,505
Number of Sequences: 1657284
Number of extensions: 9476379
Number of successful extensions: 20475
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20469
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67085240885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)