Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10f12r
         (790 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X55902-1|CAA39395.1|  700|Drosophila melanogaster Bj6 protein pr...    30   4.1  
M33496-2|AAA03215.1|  698|Drosophila melanogaster protein ( D.me...    30   4.1  
M33496-1|AAA03214.1|  700|Drosophila melanogaster protein ( D.me...    30   4.1  
AY119651-1|AAM50305.1|  700|Drosophila melanogaster RE58280p pro...    30   4.1  
AE014298-2380|AAX52501.1|  698|Drosophila melanogaster CG4211-PC...    30   4.1  
AE014298-2379|AAF48597.2|  700|Drosophila melanogaster CG4211-PA...    30   4.1  
AE014298-2378|AAN09398.1|  742|Drosophila melanogaster CG4211-PB...    30   4.1  

>X55902-1|CAA39395.1|  700|Drosophila melanogaster Bj6 protein
           protein.
          Length = 700

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 12/17 (70%), Positives = 17/17 (100%)
 Frame = -3

Query: 608 TLFVQAQRLNSMLDRQE 558
           TLF++AQ+LNS+LD+QE
Sbjct: 602 TLFMKAQQLNSLLDQQE 618


>M33496-2|AAA03215.1|  698|Drosophila melanogaster protein (
           D.melanogaster no-on-transient A gene product, complete
           cds. ).
          Length = 698

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 12/17 (70%), Positives = 17/17 (100%)
 Frame = -3

Query: 608 TLFVQAQRLNSMLDRQE 558
           TLF++AQ+LNS+LD+QE
Sbjct: 602 TLFMKAQQLNSLLDQQE 618


>M33496-1|AAA03214.1|  700|Drosophila melanogaster protein (
           D.melanogaster no-on-transient A gene product, complete
           cds. ).
          Length = 700

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 12/17 (70%), Positives = 17/17 (100%)
 Frame = -3

Query: 608 TLFVQAQRLNSMLDRQE 558
           TLF++AQ+LNS+LD+QE
Sbjct: 602 TLFMKAQQLNSLLDQQE 618


>AY119651-1|AAM50305.1|  700|Drosophila melanogaster RE58280p
           protein.
          Length = 700

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 12/17 (70%), Positives = 17/17 (100%)
 Frame = -3

Query: 608 TLFVQAQRLNSMLDRQE 558
           TLF++AQ+LNS+LD+QE
Sbjct: 602 TLFMKAQQLNSLLDQQE 618


>AE014298-2380|AAX52501.1|  698|Drosophila melanogaster CG4211-PC,
           isoform C protein.
          Length = 698

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 12/17 (70%), Positives = 17/17 (100%)
 Frame = -3

Query: 608 TLFVQAQRLNSMLDRQE 558
           TLF++AQ+LNS+LD+QE
Sbjct: 602 TLFMKAQQLNSLLDQQE 618


>AE014298-2379|AAF48597.2|  700|Drosophila melanogaster CG4211-PA,
           isoform A protein.
          Length = 700

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 12/17 (70%), Positives = 17/17 (100%)
 Frame = -3

Query: 608 TLFVQAQRLNSMLDRQE 558
           TLF++AQ+LNS+LD+QE
Sbjct: 602 TLFMKAQQLNSLLDQQE 618


>AE014298-2378|AAN09398.1|  742|Drosophila melanogaster CG4211-PB,
           isoform B protein.
          Length = 742

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 12/17 (70%), Positives = 17/17 (100%)
 Frame = -3

Query: 608 TLFVQAQRLNSMLDRQE 558
           TLF++AQ+LNS+LD+QE
Sbjct: 602 TLFMKAQQLNSLLDQQE 618


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,976,405
Number of Sequences: 53049
Number of extensions: 434773
Number of successful extensions: 855
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)