Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10f10r
(579 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AC39 Cluster: Putative uncharacterized protein; n=1; ... 34 2.8
UniRef50_Q6TVH8 Cluster: ORF010 EEV maturation protein; n=5; Par... 33 3.7
UniRef50_UPI0000DC2038 Cluster: UPI0000DC2038 related cluster; n... 33 4.9
UniRef50_P27625 Cluster: DNA-directed RNA polymerase III subunit... 33 6.4
UniRef50_UPI00015B5948 Cluster: PREDICTED: similar to transient ... 32 8.5
UniRef50_UPI0000F1D639 Cluster: PREDICTED: similar to ring finge... 32 8.5
UniRef50_Q9GZG2 Cluster: Putative uncharacterized protein; n=1; ... 32 8.5
UniRef50_Q7QTR2 Cluster: GLP_510_27846_23242; n=1; Giardia lambl... 32 8.5
>UniRef50_Q6AC39 Cluster: Putative uncharacterized protein; n=1;
Leifsonia xyli subsp. xyli|Rep: Putative uncharacterized
protein - Leifsonia xyli subsp. xyli
Length = 336
Score = 33.9 bits (74), Expect = 2.8
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Frame = -3
Query: 574 PCD---RLRSEGSRERHHA*PRDHQPHRHLLHPGAAAGQPVAPLLGDVLRCFSST---HS 413
PC+ R++ E SR H R Q R LHPG QPV L D R + H+
Sbjct: 93 PCENVQRVQPENSRVGAHRLLRSDQRPRARLHPGLVRRQPVTDQLADAHRHHRTALADHT 152
Query: 412 SPYDLMRCRQDKPTRRRSYEDG 347
P L RC + T ++ G
Sbjct: 153 VPGSL-RCHPARITGEETHPPG 173
>UniRef50_Q6TVH8 Cluster: ORF010 EEV maturation protein; n=5;
Parapoxvirus|Rep: ORF010 EEV maturation protein - Bovine
papular stomatitis virus
Length = 643
Score = 33.5 bits (73), Expect = 3.7
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -3
Query: 508 PHRHLLHPGAAAGQPVAPLLGDVLRCFSSTHSSPY-DLMRCR-QDKPTRRRSYED 350
PHR L P AA+ Q A + D C+ SSP+ D++R R +D+P ++E+
Sbjct: 72 PHRDALDPPAASTQRFAIVSRDDPACYIPESSSPFLDILRRRSEDEPELLAAFEE 126
>UniRef50_UPI0000DC2038 Cluster: UPI0000DC2038 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC2038 UniRef100 entry -
Rattus norvegicus
Length = 184
Score = 33.1 bits (72), Expect = 4.9
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = +2
Query: 152 CCVHCCLLFFIADRLRTNIQCCQPFKL----FKCSGLYKTN 262
CC HCC + + + +CCQP + C+G Y N
Sbjct: 68 CCCHCCCCYCCCAPVACSSECCQPVQCQCIQVSCAGSYCVN 108
>UniRef50_P27625 Cluster: DNA-directed RNA polymerase III subunit
RPC1; n=6; Eukaryota|Rep: DNA-directed RNA polymerase
III subunit RPC1 - Plasmodium falciparum
Length = 2339
Score = 32.7 bits (71), Expect = 6.4
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 60 NMTLQRCLSHFLMLQFNWXAQHVXXVTFYLHVVY-IAVYCFSL 185
N L C HF ++ N+ H+ + +H++Y I YC SL
Sbjct: 92 NKKLINCSGHFGYIELNYPVFHIGYYKYIIHILYCICKYCSSL 134
>UniRef50_UPI00015B5948 Cluster: PREDICTED: similar to transient
receptor potential cation channel protein painless; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to transient
receptor potential cation channel protein painless -
Nasonia vitripennis
Length = 707
Score = 32.3 bits (70), Expect = 8.5
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Frame = +3
Query: 3 KNKLSXRCSTREVTSIL**NMTLQRCLSHFLMLQFNW----XAQHVXXVTFYLHVVY 161
KN+ S CS E + N +L+ L H L+ F + +HV V F+L++VY
Sbjct: 258 KNRSSNPCSETEALLFIANNKSLRHLLKHPLLASFLYLKYLRIRHVLYVNFFLYLVY 314
>UniRef50_UPI0000F1D639 Cluster: PREDICTED: similar to ring finger
protein 31,; n=1; Danio rerio|Rep: PREDICTED: similar to
ring finger protein 31, - Danio rerio
Length = 848
Score = 32.3 bits (70), Expect = 8.5
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +2
Query: 146 FACCVHCCL-LFFIADRLRTNIQCCQPFKLFKC 241
F C HCC L ADRLR + C FKC
Sbjct: 532 FRWCAHCCFGLLHEADRLRMDCPSCGKSTCFKC 564
>UniRef50_Q9GZG2 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 590
Score = 32.3 bits (70), Expect = 8.5
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +1
Query: 325 FFLVRLIRHPRMISFELAYLVCIALDRRAKNESTRSTSEHPRVEEPQAGQQQHQDAVGGD 504
FFL + + R S + +LVC + + + + HP+ EP + H+D G
Sbjct: 517 FFLFKSLLRSRK-SKRICFLVCCSSGDQVGSAENVDMNGHPKTNEPSEKHEDHEDEENGK 575
Query: 505 E 507
E
Sbjct: 576 E 576
>UniRef50_Q7QTR2 Cluster: GLP_510_27846_23242; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_510_27846_23242 - Giardia lamblia
ATCC 50803
Length = 1534
Score = 32.3 bits (70), Expect = 8.5
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 400 DRRAKNESTRSTSEHPRVEEPQAGQQQHQDAVG 498
D+ A+ E R+ +HP VE+P Q+++DA+G
Sbjct: 1176 DKDAELERLRTLLDHPPVEQPVDDSQKYRDAIG 1208
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,682,764
Number of Sequences: 1657284
Number of extensions: 8026306
Number of successful extensions: 20511
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20494
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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