Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10f10r
         (579 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF050630-1|AAD09205.1|  884|Drosophila melanogaster Ahr homolog ...    27   0.66 
AE014297-2199|AAF55308.1|  884|Drosophila melanogaster CG6993-PA...    27   0.66 
AY118719-1|AAM50579.1|  512|Drosophila melanogaster AT29177p pro...    27   0.68 
BT029275-1|ABK30912.1|  640|Drosophila melanogaster IP09721p pro...    31   1.1  
BT022190-1|AAY51584.1|  640|Drosophila melanogaster IP01192p pro...    31   1.1  
AE014298-752|AAF46043.2|  640|Drosophila melanogaster CG33980-PA...    31   1.1  
AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p pro...    30   2.6  
AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA...    30   2.6  
AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB...    30   2.6  
AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-P...    30   2.6  
AE014297-1751|ABC66176.1|  149|Drosophila melanogaster CG34044-P...    29   6.0  

>AF050630-1|AAD09205.1|  884|Drosophila melanogaster Ahr homolog
           spineless protein.
          Length = 884

 Score = 27.1 bits (57), Expect(2) = 0.66
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 571 CDRLRSEGSRERHHA*PRDHQPHRHLLH 488
           C + + +  ++ HHA P  H  H H  H
Sbjct: 799 CHQQQQQQQQQHHHAHPHPHSHHHHHHH 826



 Score = 23.4 bits (48), Expect(2) = 0.66
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 514 HQPHRHLLHPGAAAG 470
           H PH H  HP A  G
Sbjct: 855 HHPHPHPHHPSAGGG 869


>AE014297-2199|AAF55308.1|  884|Drosophila melanogaster CG6993-PA
           protein.
          Length = 884

 Score = 27.1 bits (57), Expect(2) = 0.66
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 571 CDRLRSEGSRERHHA*PRDHQPHRHLLH 488
           C + + +  ++ HHA P  H  H H  H
Sbjct: 799 CHQQQQQQQQQHHHAHPHPHSHHHHHHH 826



 Score = 23.4 bits (48), Expect(2) = 0.66
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 514 HQPHRHLLHPGAAAG 470
           H PH H  HP A  G
Sbjct: 855 HHPHPHPHHPSAGGG 869


>AY118719-1|AAM50579.1|  512|Drosophila melanogaster AT29177p
           protein.
          Length = 512

 Score = 27.1 bits (57), Expect(2) = 0.68
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 571 CDRLRSEGSRERHHA*PRDHQPHRHLLH 488
           C + + +  ++ HHA P  H  H H  H
Sbjct: 427 CHQQQQQQQQQHHHAHPHPHSHHHHHHH 454



 Score = 23.4 bits (48), Expect(2) = 0.68
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 514 HQPHRHLLHPGAAAG 470
           H PH H  HP A  G
Sbjct: 483 HHPHPHPHHPSAGGG 497


>BT029275-1|ABK30912.1|  640|Drosophila melanogaster IP09721p
           protein.
          Length = 640

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -3

Query: 535 HHA*PRDHQPHRHLLHPGAAAGQPVAP 455
           HH     H PH H  HP  A G P  P
Sbjct: 139 HHQHQHQHHPHHHPHHPHGAVGGPPPP 165


>BT022190-1|AAY51584.1|  640|Drosophila melanogaster IP01192p
           protein.
          Length = 640

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -3

Query: 535 HHA*PRDHQPHRHLLHPGAAAGQPVAP 455
           HH     H PH H  HP  A G P  P
Sbjct: 139 HHQHQHQHHPHHHPHHPHGAVGGPPPP 165


>AE014298-752|AAF46043.2|  640|Drosophila melanogaster CG33980-PA
           protein.
          Length = 640

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -3

Query: 535 HHA*PRDHQPHRHLLHPGAAAGQPVAP 455
           HH     H PH H  HP  A G P  P
Sbjct: 139 HHQHQHQHHPHHHPHHPHGAVGGPPPP 165


>AY069788-1|AAL39933.1| 1458|Drosophila melanogaster SD02996p
           protein.
          Length = 1458

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = -3

Query: 532 HA*PRDHQPHRH-LLHPGAAAGQP 464
           H  P  H PH H L HP A AG P
Sbjct: 657 HPQPAHHHPHHHPLQHPHAGAGDP 680


>AE014298-2575|AAF48732.2| 1458|Drosophila melanogaster CG8557-PA,
           isoform A protein.
          Length = 1458

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = -3

Query: 532 HA*PRDHQPHRH-LLHPGAAAGQP 464
           H  P  H PH H L HP A AG P
Sbjct: 657 HPQPAHHHPHHHPLQHPHAGAGDP 680


>AE014298-2574|AAO41695.1| 1740|Drosophila melanogaster CG8557-PB,
            isoform B protein.
          Length = 1740

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = -3

Query: 532  HA*PRDHQPHRH-LLHPGAAAGQP 464
            H  P  H PH H L HP A AG P
Sbjct: 939  HPQPAHHHPHHHPLQHPHAGAGDP 962


>AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-PA
            protein.
          Length = 2938

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -3

Query: 535  HHA*PRDHQPHRH-LLHPGAAAGQPVAPLLG 446
            HH  P  + PH+H L HP    G P A L G
Sbjct: 1157 HHPHPHHYHPHQHPLPHPHQHQGPPAAHLQG 1187


>AE014297-1751|ABC66176.1|  149|Drosophila melanogaster CG34044-PA
           protein.
          Length = 149

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 21/59 (35%), Positives = 31/59 (52%)
 Frame = +2

Query: 32  KRSNVHFIMKHDITEMSFTFPNASVQLXCPARXLXHILFACCVHCCLLFFIADRLRTNI 208
           ++SN+  I  H IT  + + P  S Q  C A  L  +   CC  CC L+ I  +L+TN+
Sbjct: 96  RKSNIQ-IHIH-ITNYNCSQP--SWQSLCHAFRLAFVCCCCC--CCWLYTICIKLKTNL 148


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,613,928
Number of Sequences: 53049
Number of extensions: 400266
Number of successful extensions: 1656
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1652
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)