Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10f10f
(614 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P27625 Cluster: DNA-directed RNA polymerase III subunit... 36 0.58
UniRef50_UPI00015B5948 Cluster: PREDICTED: similar to transient ... 36 1.0
UniRef50_A7RY18 Cluster: Predicted protein; n=1; Nematostella ve... 35 1.3
UniRef50_UPI0000DC2038 Cluster: UPI0000DC2038 related cluster; n... 35 1.8
UniRef50_Q6TVH8 Cluster: ORF010 EEV maturation protein; n=5; Par... 34 3.1
UniRef50_Q6AC39 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_Q4YFH0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.1
UniRef50_UPI0000F1D639 Cluster: PREDICTED: similar to ring finge... 32 9.4
UniRef50_Q9GZG2 Cluster: Putative uncharacterized protein; n=1; ... 32 9.4
UniRef50_Q7QTR2 Cluster: GLP_510_27846_23242; n=1; Giardia lambl... 32 9.4
>UniRef50_P27625 Cluster: DNA-directed RNA polymerase III subunit
RPC1; n=6; Eukaryota|Rep: DNA-directed RNA polymerase
III subunit RPC1 - Plasmodium falciparum
Length = 2339
Score = 36.3 bits (80), Expect = 0.58
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 520 NMTLQRCLSHFLMLQFNWNAQHVNYVTFYLHVVY-IAVYCFSL 395
N L C HF ++ N+ H+ Y + +H++Y I YC SL
Sbjct: 92 NKKLINCSGHFGYIELNYPVFHIGYYKYIIHILYCICKYCSSL 134
>UniRef50_UPI00015B5948 Cluster: PREDICTED: similar to transient
receptor potential cation channel protein painless; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to transient
receptor potential cation channel protein painless -
Nasonia vitripennis
Length = 707
Score = 35.5 bits (78), Expect = 1.0
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = -2
Query: 577 KNKLSQRCSTREVTSIL**NMTLQRCLSHFLMLQFNW----NAQHVNYVTFYLHVVY 419
KN+ S CS E + N +L+ L H L+ F + +HV YV F+L++VY
Sbjct: 258 KNRSSNPCSETEALLFIANNKSLRHLLKHPLLASFLYLKYLRIRHVLYVNFFLYLVY 314
>UniRef50_A7RY18 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 150
Score = 35.1 bits (77), Expect = 1.3
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = -1
Query: 446 CHILFAC---CVHCCLLFFIADRLRTNIQCCQPFKLFKCSGLYKTNL*IT*VLILRFLRD 276
C++LF C C+ CC + FI + I+CC + LF C YK + +L + +
Sbjct: 70 CYMLFICYKCCIECCYMLFIC--YKCCIECC--YMLFFC---YKCCIECCYMLFICYKCC 122
Query: 275 IVCIFLIFFWF 243
I C +++F +
Sbjct: 123 IECCYMLFICY 133
Score = 34.7 bits (76), Expect = 1.8
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = -1
Query: 446 CHILF---ACCVHCCLLFFIADRLRTNIQCCQPFKLFKCSGLYKTNL*IT*VLILRFLRD 276
C++LF CC+ CC + FI + I+CC + LF C YK + +L +
Sbjct: 14 CYLLFFCYKCCIECCYMLFIC--YKCCIECC--YMLFFC---YKCCIECCYMLFFCYKCC 66
Query: 275 IVCIFLIFFWF 243
I C +++F +
Sbjct: 67 IECCYMLFICY 77
Score = 34.3 bits (75), Expect = 2.3
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = -1
Query: 434 FACCVHCCLLFFIADRLRTNIQCCQPFKLFKCSGLYKTNL*IT*VLILRFLRDIVCIFLI 255
+ CC+ CC L F + I+CC + LF C YK + +L + I C +++
Sbjct: 7 YKCCIECCYLLFFC--YKCCIECC--YMLFIC---YKCCIECCYMLFFCYKCCIECCYML 59
Query: 254 FFWF 243
FF +
Sbjct: 60 FFCY 63
>UniRef50_UPI0000DC2038 Cluster: UPI0000DC2038 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC2038 UniRef100 entry -
Rattus norvegicus
Length = 184
Score = 34.7 bits (76), Expect = 1.8
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Frame = -1
Query: 464 CPA--RKLCHILFACCVHCCLLFFIADRLRTNIQCCQPFKL----FKCSGLYKTN 318
CP+ R LC CC HCC + + + +CCQP + C+G Y N
Sbjct: 55 CPSSCRGLC-CAKGCCCHCCCCYCCCAPVACSSECCQPVQCQCIQVSCAGSYCVN 108
>UniRef50_Q6TVH8 Cluster: ORF010 EEV maturation protein; n=5;
Parapoxvirus|Rep: ORF010 EEV maturation protein - Bovine
papular stomatitis virus
Length = 643
Score = 33.9 bits (74), Expect = 3.1
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +3
Query: 72 PHRHLLHPGAAAGQPVAPLLGDVLRCFSSTHSSPY-DLMRCR-QDKPTRRRSYEDGGLNE 245
PHR L P AA+ Q A + D C+ SSP+ D++R R +D+P ++E+ N
Sbjct: 72 PHRDALDPPAASTQRFAIVSRDDPACYIPESSSPFLDILRRRSEDEPELLAAFEE---NP 128
Query: 246 PKKNQKNTNNISK 284
P ++ + +++
Sbjct: 129 PPAGARSIDELNQ 141
>UniRef50_Q6AC39 Cluster: Putative uncharacterized protein; n=1;
Leifsonia xyli subsp. xyli|Rep: Putative uncharacterized
protein - Leifsonia xyli subsp. xyli
Length = 336
Score = 33.9 bits (74), Expect = 3.1
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Frame = +3
Query: 6 PCD---RLRSEGSRERHHA*PRDHQPHRHLLHPGAAAGQPVAPLLGDVLRCFSST---HS 167
PC+ R++ E SR H R Q R LHPG QPV L D R + H+
Sbjct: 93 PCENVQRVQPENSRVGAHRLLRSDQRPRARLHPGLVRRQPVTDQLADAHRHHRTALADHT 152
Query: 168 SPYDLMRCRQDKPTRRRSYEDG 233
P L RC + T ++ G
Sbjct: 153 VPGSL-RCHPARITGEETHPPG 173
>UniRef50_Q4YFH0 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 83
Score = 32.7 bits (71), Expect = 7.1
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -2
Query: 499 LSHFLMLQFNWNAQHVNYVTFYLHV-VYIAVYCF 401
L F ++ N H++Y+TFYLH+ +YI +Y +
Sbjct: 42 LIFFFVVLCNIYCFHISYITFYLHIYIYIYIYIY 75
>UniRef50_UPI0000F1D639 Cluster: PREDICTED: similar to ring finger
protein 31,; n=1; Danio rerio|Rep: PREDICTED: similar to
ring finger protein 31, - Danio rerio
Length = 848
Score = 32.3 bits (70), Expect = 9.4
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -1
Query: 434 FACCVHCCL-LFFIADRLRTNIQCCQPFKLFKC 339
F C HCC L ADRLR + C FKC
Sbjct: 532 FRWCAHCCFGLLHEADRLRMDCPSCGKSTCFKC 564
>UniRef50_Q9GZG2 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 590
Score = 32.3 bits (70), Expect = 9.4
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = -3
Query: 255 FFLVRLIRHPRMISFELAYLVCIALDRRAKNESTRSTSEHPRVEEPQAGQQQHQDAVGGD 76
FFL + + R S + +LVC + + + + HP+ EP + H+D G
Sbjct: 517 FFLFKSLLRSRK-SKRICFLVCCSSGDQVGSAENVDMNGHPKTNEPSEKHEDHEDEENGK 575
Query: 75 E 73
E
Sbjct: 576 E 576
>UniRef50_Q7QTR2 Cluster: GLP_510_27846_23242; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_510_27846_23242 - Giardia lamblia
ATCC 50803
Length = 1534
Score = 32.3 bits (70), Expect = 9.4
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = -3
Query: 180 DRRAKNESTRSTSEHPRVEEPQAGQQQHQDAVG 82
D+ A+ E R+ +HP VE+P Q+++DA+G
Sbjct: 1176 DKDAELERLRTLLDHPPVEQPVDDSQKYRDAIG 1208
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,600,953
Number of Sequences: 1657284
Number of extensions: 10403328
Number of successful extensions: 28802
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 27588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28773
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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