Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10f09f
(623 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 66 3e-11
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 66 3e-11
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 65 3e-11
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 65 3e-11
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 64 1e-10
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 64 1e-10
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 59 2e-09
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 59 2e-09
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 59 2e-09
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 59 2e-09
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 59 2e-09
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 59 2e-09
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 57 9e-09
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 57 9e-09
U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein ... 42 4e-04
AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or cys... 42 4e-04
Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z69716-3|CAA93529.1| 335|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL110500-3|CAB54483.1| 493|Caenorhabditis elegans Hypothetical ... 28 6.2
AF125952-1|AAD14701.1| 571|Caenorhabditis elegans Hypothetical ... 28 6.2
AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical ... 28 6.2
AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical ... 27 8.2
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 65.7 bits (153), Expect = 3e-11
Identities = 37/143 (25%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Frame = +1
Query: 202 IASPLGVMLLLSLYESGAGAQSKEEIRE-ILGGGEAQESSHTYGLLNQRY-AEFDPKFLT 375
+ SP+ ++L L+L GA ++ +IR ++ G ++ + +N+ + +
Sbjct: 32 VFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLNSSVNDVETL 91
Query: 376 VANKIYVSDQYKLADAFS-RTANLFRSEVDNINFGDPKNAADIINRWADEQTQGHIKTPV 552
+AN+++VS + + AF+ + +E I+F + AA I+N++ E T+G I +
Sbjct: 92 IANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMI 151
Query: 553 SEDKIDPATAVAMFNVIFFQGHW 621
D + A+ + N IFFQG W
Sbjct: 152 KPDNLKDVDAI-LINAIFFQGDW 173
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 65.7 bits (153), Expect = 3e-11
Identities = 37/143 (25%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Frame = +1
Query: 202 IASPLGVMLLLSLYESGAGAQSKEEIRE-ILGGGEAQESSHTYGLLNQRY-AEFDPKFLT 375
+ SP+ ++L L+L GA ++ +IR ++ G ++ + +N+ + +
Sbjct: 32 VFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLNSSVNDVETL 91
Query: 376 VANKIYVSDQYKLADAFS-RTANLFRSEVDNINFGDPKNAADIINRWADEQTQGHIKTPV 552
+AN+++VS + + AF+ + +E I+F + AA I+N++ E T+G I +
Sbjct: 92 IANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMI 151
Query: 553 SEDKIDPATAVAMFNVIFFQGHW 621
D + A+ + N IFFQG W
Sbjct: 152 KPDNLKDVDAI-LINAIFFQGDW 173
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 65.3 bits (152), Expect = 3e-11
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Frame = +1
Query: 154 LKILKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQES--SHTY 327
L +L++ NL + + + SPL + L LSL A ++++EIR+ L G E H
Sbjct: 22 LSLLRQQ-NLTE--SFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFS 78
Query: 328 GLLNQRYAEFDPKFLTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADII 504
+ + VAN I+ + + + + L+ + +NF D + +A+ I
Sbjct: 79 NISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAI 138
Query: 505 NRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHW 621
N + E T+GHIK ++ D I + N +F+ +W
Sbjct: 139 NNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANW 177
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 65.3 bits (152), Expect = 3e-11
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 3/159 (1%)
Frame = +1
Query: 154 LKILKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQES--SHTY 327
L +L++ NL + + + SPL + L LSL A ++++EIR+ L G E H
Sbjct: 22 LSLLRQQ-NLTE--SFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFS 78
Query: 328 GLLNQRYAEFDPKFLTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADII 504
+ + VAN I+ + + + + L+ + +NF D + +A+ I
Sbjct: 79 NISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAI 138
Query: 505 NRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHW 621
N + E T+GHIK ++ D I + N +F+ +W
Sbjct: 139 NNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANW 177
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 63.7 bits (148), Expect = 1e-10
Identities = 39/155 (25%), Positives = 77/155 (49%), Gaps = 2/155 (1%)
Frame = +1
Query: 163 LKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTYGLLNQ 342
LK L +V+ SPL + L L+L +GA +++E+ ++LGG E + L +
Sbjct: 13 LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGGSRIFEE---FSGLME 69
Query: 343 RYAEFDPKFLT-VANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFGDPKNAADIINRWA 516
+ D T + N+++V+ Y + + T L+++ ++++F + AA +N +
Sbjct: 70 AVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFV 129
Query: 517 DEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHW 621
+ T G IK + D + A A + N ++F+ W
Sbjct: 130 ENHTNGKIKDLIPADSANNAFAF-LVNAMYFKADW 163
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 63.7 bits (148), Expect = 1e-10
Identities = 39/155 (25%), Positives = 77/155 (49%), Gaps = 2/155 (1%)
Frame = +1
Query: 163 LKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTYGLLNQ 342
LK L +V+ SPL + L L+L +GA +++E+ ++LGG E + L +
Sbjct: 13 LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGGSRIFEE---FSGLME 69
Query: 343 RYAEFDPKFLT-VANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFGDPKNAADIINRWA 516
+ D T + N+++V+ Y + + T L+++ ++++F + AA +N +
Sbjct: 70 AVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFV 129
Query: 517 DEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHW 621
+ T G IK + D + A A + N ++F+ W
Sbjct: 130 ENHTNGKIKDLIPADSANNAFAF-LVNAMYFKADW 163
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Frame = +1
Query: 208 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 382 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADIINRWADEQTQGHIKTPVSE 558
N ++ +K+ ++ L+ + +++F + + A+ IN + E T HIK +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 559 DKIDPATAVAMFNVIFFQGHW 621
D I+ + N ++F+ W
Sbjct: 148 DSINSDLVAVLTNALYFKADW 168
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Frame = +1
Query: 208 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 382 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADIINRWADEQTQGHIKTPVSE 558
N ++ +K+ ++ L+ + +++F + + A+ IN + E T HIK +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 559 DKIDPATAVAMFNVIFFQGHW 621
D I+ + N ++F+ W
Sbjct: 148 DSINSDLVAVLTNALYFKADW 168
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Frame = +1
Query: 208 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 382 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADIINRWADEQTQGHIKTPVSE 558
N ++ +K+ ++ L+ + +++F + + A+ IN + E T HIK +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 559 DKIDPATAVAMFNVIFFQGHW 621
D I+ + N ++F+ W
Sbjct: 148 DSINSDLVAVLTNALYFKADW 168
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Frame = +1
Query: 208 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 382 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADIINRWADEQTQGHIKTPVSE 558
N ++ +K+ ++ L+ + +++F + + A+ IN + E T HIK +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 559 DKIDPATAVAMFNVIFFQGHW 621
D I+ + N ++F+ W
Sbjct: 148 DSINSDLVAVLTNALYFKADW 168
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Frame = +1
Query: 208 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 382 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADIINRWADEQTQGHIKTPVSE 558
N ++ +K+ ++ L+ + +++F + + A+ IN + E T HIK +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 559 DKIDPATAVAMFNVIFFQGHW 621
D I+ + N ++F+ W
Sbjct: 148 DSINSDLVAVLTNALYFKADW 168
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Frame = +1
Query: 208 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
SPL + L LSL A +++++IRE L G + Q H + A + +A
Sbjct: 28 SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87
Query: 382 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADIINRWADEQTQGHIKTPVSE 558
N ++ +K+ ++ L+ + +++F + + A+ IN + E T HIK +
Sbjct: 88 NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147
Query: 559 DKIDPATAVAMFNVIFFQGHW 621
D I+ + N ++F+ W
Sbjct: 148 DSINSDLVAVLTNALYFKADW 168
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 57.2 bits (132), Expect = 9e-09
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Frame = +1
Query: 190 DKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTYGLLNQRYAEFDPKF 369
+++++ SPL + L+LSL +G S+++IR L G E + + + K
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 370 LTV--ANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFGDPKNAADIINRWADEQTQGHI 540
+ V ANK+Y+ + + F TA + ++ +++ P A IN + + T G I
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLTTPA-AVQEINSFVNTATNGKI 139
Query: 541 KTPVSEDKIDPATAVAMFNVIFFQGHW 621
K ++D I A A+ + N I+F+ W
Sbjct: 140 KNIATQDSIKDAIAL-LINSIYFKADW 165
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 57.2 bits (132), Expect = 9e-09
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Frame = +1
Query: 190 DKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTYGLLNQRYAEFDPKF 369
+++++ SPL + L+LSL +G S+++IR L G E + + + K
Sbjct: 21 NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80
Query: 370 LTV--ANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFGDPKNAADIINRWADEQTQGHI 540
+ V ANK+Y+ + + F TA + ++ +++ P A IN + + T G I
Sbjct: 81 VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLTTPA-AVQEINSFVNTATNGKI 139
Query: 541 KTPVSEDKIDPATAVAMFNVIFFQGHW 621
K ++D I A A+ + N I+F+ W
Sbjct: 140 KNIATQDSIKDAIAL-LINSIYFKADW 165
>U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein 8
protein.
Length = 339
Score = 41.9 bits (94), Expect = 4e-04
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 5/158 (3%)
Frame = +1
Query: 163 LKESYNLADDKNVIASPLGVMLLL-SLYESGAGAQSKEEIREIL--GGGEAQESSHTYGL 333
LK + ++ + SP+ + L L SLYE+ G +++ +I + L + + +H +
Sbjct: 14 LKLLHQQDHSQSFVFSPIAISLALYSLYEAARG-ETRSQIHDCLFKNATDGEMVTHFSNV 72
Query: 334 LNQRYA-EFDPKFLTVANKIYVSDQYKLAD-AFSRTANLFRSEVDNINFGDPKNAADIIN 507
A + DP+ + + N I + K + L+ EV + + + K IN
Sbjct: 73 STALSAMKKDPQ-VKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLDNEKETIKTIN 131
Query: 508 RWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHW 621
+ E T GHIK ++ ID V + F+ W
Sbjct: 132 KLIRENTDGHIKKINTKISIDKDQVVVFLSAACFEAQW 169
>AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 199
Score = 41.9 bits (94), Expect = 4e-04
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 5/158 (3%)
Frame = +1
Query: 163 LKESYNLADDKNVIASPLGVMLLL-SLYESGAGAQSKEEIREIL--GGGEAQESSHTYGL 333
LK + ++ + SP+ + L L SLYE+ G +++ +I + L + + +H +
Sbjct: 13 LKLLHQQDHSQSFVFSPIAISLALYSLYEAARG-ETRSQIHDCLFKNATDGEMVTHFSNV 71
Query: 334 LNQRYA-EFDPKFLTVANKIYVSDQYKLAD-AFSRTANLFRSEVDNINFGDPKNAADIIN 507
A + DP+ + + N I + K + L+ EV + + + K IN
Sbjct: 72 STALSAMKKDPQ-VKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLDNEKETIKTIN 130
Query: 508 RWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHW 621
+ E T GHIK ++ ID V + F+ W
Sbjct: 131 KLIRENTDGHIKKINTKISIDKDQVVVFLSAACFEAQW 168
>Z46937-1|CAA87056.2| 1036|Caenorhabditis elegans Hypothetical protein
F43C1.1 protein.
Length = 1036
Score = 29.5 bits (63), Expect = 2.0
Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +2
Query: 377 SPIKYTFPTSISWPTRSPGQRICSEAKWTT---LTLEIQRMPLISSTVGRTNRLKDT*RL 547
SP P+S P S + I T TL I R SSTV + +T L
Sbjct: 960 SPPPPPLPSSTPPPVSSEHEEINVRQSSTLSGGYTLSIDRFYSSSSTVSSRKQFNETRDL 1019
Query: 548 LSAKTKLTPP 577
LS KL+PP
Sbjct: 1020 LSKSLKLSPP 1029
>Z69716-3|CAA93529.1| 335|Caenorhabditis elegans Hypothetical
protein C04B4.3 protein.
Length = 335
Score = 28.7 bits (61), Expect = 3.6
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 9/175 (5%)
Frame = +1
Query: 49 RLLLLVTLVCGTQAFYMFGHEFSRTRLGDAIDKTSLKILKESYNLADDKNVIASPLGVML 228
+LLL V + G + + H + I KES +L D +S +G +
Sbjct: 137 QLLLSVLVYTGARHIDIIAHSMGVSIARAIIQGGKFTSEKESCDLGSD---FSSLIGTFI 193
Query: 229 LLSLYESG-----AG----AQSKEEIREILGGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
+S G AG A KE IR+I ES ++ L +Y+ KFLT
Sbjct: 194 AISSANYGMCSCEAGTAFPACDKEVIRKINPLENQLESKKSF--LQTKYS----KFLTKL 247
Query: 382 NKIYVSDQYKLADAFSRTANLFRSEVDNINFGDPKNAADIINRWADEQTQGHIKT 546
NK++ + +A +S+ +F N+ +G + N W + H++T
Sbjct: 248 NKVHKKEAEFIASIWSKDDEVFLK--GNLVWGKQTSLVPGSNIWKEYPQLTHMET 300
>AL110500-3|CAB54483.1| 493|Caenorhabditis elegans Hypothetical
protein Y87G2A.3 protein.
Length = 493
Score = 27.9 bits (59), Expect = 6.2
Identities = 19/100 (19%), Positives = 41/100 (41%)
Frame = +1
Query: 295 GGEAQESSHTYGLLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTANLFRSEVDNINF 474
GG + + G+ + DP + + + Y D+ + T ++ S ++ +
Sbjct: 304 GGRPNHALYFVGMSGSKLFYLDPHYCRPKTES-TAKMYAEKDSTATTDDVGFSHLEEL-V 361
Query: 475 GDPKNAADIINRWADEQTQGHIKTPVSEDKIDPATAVAMF 594
P AD+ + D + + + +DP+ A+AMF
Sbjct: 362 PLPSQTADVYTKMDDSTYHCQMMLWIEYENVDPSLALAMF 401
>AF125952-1|AAD14701.1| 571|Caenorhabditis elegans Hypothetical
protein C01B4.9 protein.
Length = 571
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = -1
Query: 587 ATAVAGSILSSLTGVFMCP*VCSSAQRLMISAAFFGSPKLMLSTSLLNRFAVLENASANL 408
+T+VAG+++S LTG + +S+ FG + ++ S+L A L + A+
Sbjct: 80 STSVAGAVISILTGCYYLAGPLASS-----FVNVFGIRSVAIAGSILATTAFLLSRFAST 134
Query: 407 YWSETYILLATVKNFG 360
W E Y+L + G
Sbjct: 135 IW-ELYLLFGVLGGIG 149
>AC006722-7|AAK68412.2| 544|Caenorhabditis elegans Hypothetical
protein Y19D10A.12 protein.
Length = 544
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = -1
Query: 587 ATAVAGSILSSLTGVFMCP*VCSSAQRLMISAAFFGSPKLMLSTSLLNRFAVLENASANL 408
+T+VAG+++S LTG + +S+ FG + ++ S+L A L + A+
Sbjct: 80 STSVAGAVISILTGCYYLAGPLASS-----FVNVFGIRSVAIAGSILATTAFLLSRFAST 134
Query: 407 YWSETYILLATVKNFG 360
W E Y+L + G
Sbjct: 135 IW-ELYLLFGVLGGIG 149
>AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical
protein T28F2.4a protein.
Length = 748
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 37 TVMDRLLLLVTLVCGTQAFYMFGHEFSRTRLGDAIDKTSLKILKESYNLADDKNVIASPL 216
T D+ LV + FG+ FS RLG+ ++K L+ + N+A KN + + L
Sbjct: 319 TFFDKFYQSNVLVVRRKQPTYFGNLFSTARLGELLEKNHLE-YGRNINIAQYKNGVRTTL 377
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,197,252
Number of Sequences: 27780
Number of extensions: 322946
Number of successful extensions: 831
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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