Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10f09f
(623 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 58 5e-09
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 51 7e-07
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 47 9e-06
At1g64030.1 68414.m07252 serpin family protein / serine protease... 37 0.013
At1g62170.1 68414.m07013 serpin family protein / serine protease... 35 0.038
At2g35580.1 68415.m04357 serpin family protein / serine protease... 35 0.050
At2g40570.1 68415.m05005 initiator tRNA phosphoribosyl transfera... 30 1.1
At1g63280.1 68414.m07154 serpin-related / serine protease inhibi... 29 1.9
At3g60860.1 68416.m06808 guanine nucleotide exchange family prot... 29 3.3
At2g14540.1 68415.m01628 serpin family protein / serine protease... 29 3.3
At1g51330.1 68414.m05772 serpin-related / serine protease inhibi... 28 4.4
At5g64520.2 68418.m08107 DNA repair protein-related contains wea... 27 7.7
At5g64520.1 68418.m08106 DNA repair protein-related contains wea... 27 7.7
At1g25210.1 68414.m03129 UDP-3-O-acyl N-acetylglycosamine deacet... 27 7.7
At1g25141.1 68414.m03121 UDP-3-0-acyl N-acetylglucosamine deacet... 27 7.7
At1g25054.1 68414.m03117 UDP-3-O-acyl N-acetylglycosamine deacet... 27 7.7
At1g24880.1 68414.m03111 UDP-3-0-acyl N-acetylglucosamine deacet... 27 7.7
At1g24793.1 68414.m03107 UDP-3-0-acyl N-acetylglucosamine deacet... 27 7.7
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 58.0 bits (134), Expect = 5e-09
Identities = 38/155 (24%), Positives = 69/155 (44%), Gaps = 7/155 (4%)
Frame = +1
Query: 178 NLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTYGLLNQRYAEF 357
++A+ NV+ SP+ + +LLSL +G+ +KEEI L + + E
Sbjct: 25 DVANGSNVVFSPMSINVLLSLIAAGSNPVTKEEILSFLMSPSTDHLNAVLAKIADGGTER 84
Query: 358 DPKFLTVANKIYVSDQYKLADAFSR-TANLFRSEVDNINFG-DPKNAADIINRWADEQTQ 531
L+ A+ +++ L +F N +++ ++F P D +N WAD T
Sbjct: 85 SDLCLSTAHGVWIDKSSYLKPSFKELLENSYKASCSQVDFATKPVEVIDEVNIWADVHTN 144
Query: 532 GHIKTPVSEDKIDPA-----TAVAMFNVIFFQGHW 621
G IK +S D D + + + N ++F+ W
Sbjct: 145 GLIKQILSRDCTDTIKEIRNSTLILANAVYFKAAW 179
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 50.8 bits (116), Expect = 7e-07
Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 9/156 (5%)
Frame = +1
Query: 181 LADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQE-----SSHTYGLLNQR 345
++ + NVI SP + ++LS+ +G+ +K++I L + S +L
Sbjct: 25 VSQNSNVIFSPASINVVLSIIAAGSAGATKDQILSFLKFSSTDQLNSFSSEIVSAVLADG 84
Query: 346 YAEFDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFGDPKNAADII---NRW 513
A PK L+VAN ++ +F + + +++ + +F A ++I N W
Sbjct: 85 SANGGPK-LSVANGAWIDKSLSFKPSFKQLLEDSYKAASNQADF--QSKAVEVIAEVNSW 141
Query: 514 ADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHW 621
A+++T G I + E D T + N ++F+G W
Sbjct: 142 AEKETNGLITEVLPEGSADSMTKLIFANALYFKGTW 177
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 47.2 bits (107), Expect = 9e-06
Identities = 34/155 (21%), Positives = 71/155 (45%), Gaps = 8/155 (5%)
Frame = +1
Query: 181 LADDKNVIASPLGVMLLLSLYESGAGAQSKEEIRE--ILGGGEAQES--SHTYGLLNQRY 348
+A+ N++ SP+ + +LL L +G+ +KE+I +L + + + T +
Sbjct: 25 VANGSNLVFSPMSINVLLCLIAAGSNCVTKEQILSFIMLPSSDYLNAVLAKTVSVALNDG 84
Query: 349 AEFDPKFLTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFG-DPKNAADIINRWADE 522
E L+ A +++ +F N + + + ++F P + +N WA+
Sbjct: 85 MERSDLHLSTAYGVWIDKSLSFKPSFKDLLENSYNATCNQVDFATKPAEVINEVNAWAEV 144
Query: 523 QTQGHIKTPVSEDKIDP--ATAVAMFNVIFFQGHW 621
T G IK +S+D I + + + N ++F+G W
Sbjct: 145 HTNGLIKEILSDDSIKTIRESMLILANAVYFKGAW 179
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 36.7 bits (81), Expect = 0.013
Identities = 33/152 (21%), Positives = 58/152 (38%), Gaps = 8/152 (5%)
Frame = +1
Query: 190 DKNVIASPLGVMLLLSLYESGAGAQSKE-EIREILGGGEAQESSHTYGLLNQ-----RYA 351
D NVI SP + ++++ +G G +I L E + L R A
Sbjct: 28 DSNVIFSPASINSAITMHAAGPGGDLVSGQILSFLRSSSIDELKTVFRELASVVYADRSA 87
Query: 352 EFDPKFLTVANKIYVSDQYKLADAFSRT-ANLFRSEVDNINF-GDPKNAADIINRWADEQ 525
PK +T AN +++ F N F++ ++F + + +N W +
Sbjct: 88 TGGPK-ITAANGLWIDKSLPTDPKFKDLFENFFKAVYVPVDFRSEAEEVRKEVNSWVEHH 146
Query: 526 TQGHIKTPVSEDKIDPATAVAMFNVIFFQGHW 621
T IK + + + T N + F+G W
Sbjct: 147 TNNLIKDLLPDGSVTSLTNKIYANALSFKGAW 178
>At1g62170.1 68414.m07013 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
GI:9937311 from [Cucurbita maxima]; contains Pfam
profile PF00079: Serpin (serine protease inhibitor)
Length = 433
Score = 35.1 bits (77), Expect = 0.038
Identities = 32/160 (20%), Positives = 64/160 (40%), Gaps = 12/160 (7%)
Frame = +1
Query: 178 NLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTYGLLNQRYAEF 357
++A + N + SP + L++ + +G + EE+R + S+ + + A
Sbjct: 85 SVAKNSNFVFSPASINAALTMVAASSGGEQGEELRSFILSFLKSSSTDELNAIFREIASV 144
Query: 358 ---------DPKFLTVANKIYVSDQYKLADAFSRTA--NLFRSEVDNINF-GDPKNAADI 501
PK + V N +++ DQ + S+ N F + ++F +
Sbjct: 145 VLVDGSKKGGPK-IAVVNGMWM-DQSLSVNPLSKDLFKNFFSAAFAQVDFRSKAEEVRTE 202
Query: 502 INRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHW 621
+N WA T G IK + + T + ++F+G W
Sbjct: 203 VNAWASSHTNGLIKDLLPRGSVTSLTDRVYGSALYFKGTW 242
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 34.7 bits (76), Expect = 0.050
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +1
Query: 370 LTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFGDPKNAADI-INRWADEQTQGHIK 543
++ AN +++ + +F N +++ + ++F + + +N W ++QT G I
Sbjct: 92 ISAANGLWIEKTLNVEPSFKDLLLNSYKAAFNRVDFRTKADEVNREVNSWVEKQTNGLIT 151
Query: 544 TPV-SEDKIDPATAVAMFNVIFFQGHW 621
+ S K P T N +FF G W
Sbjct: 152 NLLPSNPKSAPLTDHIFANALFFNGRW 178
>At2g40570.1 68415.m05005 initiator tRNA phosphoribosyl transferase
family protein contains Pfam profile: PF04179 initiator
tRNA phosphoribosyl transferase
Length = 521
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = -3
Query: 597 VKHCNGRGGVNFVFADRSLYVSLSLFVRPTVDDISGILWISKVNVVHFASEQIRC 433
VK GGVN +D L +S + P VD+ + W+S N+ AS Q+ C
Sbjct: 327 VKCSKSNGGVNHAKSDEILCLSAQI---PKVDEERLVFWLSSTNLAVGAS-QVAC 377
>At1g63280.1 68414.m07154 serpin-related / serine protease
inhibitor-related similar to protein zx [Hordeum vulgare
subsp. vulgare] GI:19071, serpin [Triticum aestivum]
GI:1885346
Length = 120
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +1
Query: 502 INRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHW 621
+N+WA + T G I + + T N ++F+G W
Sbjct: 16 LNKWASDHTNGLIIDLLPRGSVKSETVQVYGNALYFKGAW 55
>At3g60860.1 68416.m06808 guanine nucleotide exchange family protein
similar to guanine nucleotide exchange factor, Homo
sapiens, GI:5456754; contains Pfam profile PF01369: Sec7
domain
Length = 1793
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +1
Query: 256 GAQSKEEIREILGG----GEAQESSHTYGLLNQRYAEFDPKFLTVANKIYV 396
G + E IR L G GEAQ+ +RY + +PK T A+ YV
Sbjct: 693 GMEFDEAIRTFLEGFRLPGEAQKIDRIMEKFAERYCKCNPKVFTSADSAYV 743
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +1
Query: 439 NLFRSEVDNINFGDPKNAADI-INRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQG 615
N F++ ++F + +N WA T IK + + T N ++F+G
Sbjct: 145 NFFKASFAKVDFRHKAEEVRLDVNTWASRHTNDLIKEILPRGSVTSLTNWIYGNALYFKG 204
Query: 616 HW 621
W
Sbjct: 205 AW 206
>At1g51330.1 68414.m05772 serpin-related / serine protease
inhibitor-related similar to serpin [Hordeum vulgare
subsp. vulgare] CAA64599.1 GI:1197577
Length = 193
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +1
Query: 502 INRWADEQTQGHIKTPVSEDKIDPATAVAMFNVIFFQGHW 621
+N WA T G IK + + T N ++F+G W
Sbjct: 39 VNSWALRHTNGLIKNLLPPGSVTNQTIKIYGNALYFKGAW 78
>At5g64520.2 68418.m08107 DNA repair protein-related contains weak
similarity to DNA-repair protein XRCC2 (X-ray repair
cross-complementing protein 2) (Swiss-Prot:O43543) [Homo
sapiens]
Length = 342
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -3
Query: 612 LEENDVKHCNGRGGVNFVFADRSLYVS-LSLFVRPTVDDISGILWISKVNVVHFASEQIR 436
LEE++VK C D LY S + F+ D +L S + +H+ +Q
Sbjct: 121 LEESNVKSCKSAEEKTKTVFDEELYASCMKRFLYVRCYDSLELL--SSLKTLHYRIQQQE 178
Query: 435 CPGERVGQLIL 403
G +VG L++
Sbjct: 179 ACGSQVGVLMI 189
>At5g64520.1 68418.m08106 DNA repair protein-related contains weak
similarity to DNA-repair protein XRCC2 (X-ray repair
cross-complementing protein 2) (Swiss-Prot:O43543) [Homo
sapiens]
Length = 372
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -3
Query: 612 LEENDVKHCNGRGGVNFVFADRSLYVS-LSLFVRPTVDDISGILWISKVNVVHFASEQIR 436
LEE++VK C D LY S + F+ D +L S + +H+ +Q
Sbjct: 121 LEESNVKSCKSAEEKTKTVFDEELYASCMKRFLYVRCYDSLELL--SSLKTLHYRIQQQE 178
Query: 435 CPGERVGQLIL 403
G +VG L++
Sbjct: 179 ACGSQVGVLMI 189
>At1g25210.1 68414.m03129 UDP-3-O-acyl N-acetylglycosamine
deacetylase family protein contains Pfam domain PF03331:
UDP-3-O-acyl N-acetylglycosamine deacetylase
Length = 955
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -3
Query: 216 ERRRYHILVVS*VVGFLKNLQGGLVDGIAESCP 118
E RYH +S GF K + G+ + E CP
Sbjct: 886 ESARYHTAFISGKDGFFKPVTLGVAPNVGEPCP 918
>At1g25141.1 68414.m03121 UDP-3-0-acyl N-acetylglucosamine
deacetylase family protein / F-box protein-related
contains weak hit to TIGRFAM TIGR01640 : F-box protein
interaction domain and weak hit to Pfam PF00646: F-box
domain;
Length = 925
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -3
Query: 216 ERRRYHILVVS*VVGFLKNLQGGLVDGIAESCP 118
E RYH +S GF K + G+ + E CP
Sbjct: 856 ESARYHTAFISGKDGFFKPVTLGVAPNVGEPCP 888
>At1g25054.1 68414.m03117 UDP-3-O-acyl N-acetylglycosamine
deacetylase family protein contains Pfam domain PF03331:
UDP-3-O-acyl N-acetylglycosamine deacetylase
Length = 949
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -3
Query: 216 ERRRYHILVVS*VVGFLKNLQGGLVDGIAESCP 118
E RYH +S GF K + G+ + E CP
Sbjct: 880 ESARYHTAFISGKDGFFKPVTLGVAPNVGEPCP 912
>At1g24880.1 68414.m03111 UDP-3-0-acyl N-acetylglucosamine
deacetylase family protein / F-box protein-related
contains weak hit to TIGRFAM TIGR01640 : F-box protein
interaction domain and weak hit to Pfam PF00646: F-box
domain; similar to ESTs dbj AV442495.1, gb|BE522756.1,
gb|T42945.1, gb|BE525268.1, gb|BE523201.1,
gb|BE526298.1, gb|T42945.1, gb|AA651584.1,
dbj|AV552951.1, dbj|AV547151.1, dbj|AV563142.1
Length = 905
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -3
Query: 216 ERRRYHILVVS*VVGFLKNLQGGLVDGIAESCP 118
E RYH +S GF K + G+ + E CP
Sbjct: 836 ESARYHTAFISGKDGFFKPVTLGVAPNVGEPCP 868
>At1g24793.1 68414.m03107 UDP-3-0-acyl N-acetylglucosamine
deacetylase family protein / F-box protein-related
contains weak hit to TIGRFAM TIGR01640 : F-box protein
interaction domain and weak hit to Pfam PF00646: F-box
domain; similar to ESTs dbj AV442495.1, gb|BE522756.1,
gb|T42945.1, gb|BE525268.1, gb|BE523201.1,
gb|BE526298.1, gb|T42945.1, gb|AA651584.1,
dbj|AV552951.1, dbj|AV547151.1, dbj|AV563142.1
Length = 925
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -3
Query: 216 ERRRYHILVVS*VVGFLKNLQGGLVDGIAESCP 118
E RYH +S GF K + G+ + E CP
Sbjct: 856 ESARYHTAFISGKDGFFKPVTLGVAPNVGEPCP 888
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,488,374
Number of Sequences: 28952
Number of extensions: 308296
Number of successful extensions: 943
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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