Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10f06f
         (588 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    24   4.2  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   5.5  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   9.7  

>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 505 SKFELLSFCPIQQLKYQPSMSHDSCSRAHG 416
           +K  L + CP   L Y       +CS+A G
Sbjct: 271 AKIALTNLCPAVALSYGGRKPSSTCSKASG 300


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 292 YCCRSGSAADTQAIADIVTYH 354
           Y CRS   A +     I+TYH
Sbjct: 550 YMCRSNPPAQSDHNGKIITYH 570


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +1

Query: 277  ITDQIYCCRSGSAADTQAIADIVTYHLNFHKMELGDPPLVETAA-AIFREL 426
            I  Q Y    GSA + ++  +I    L  H   L DP  ++ +  ++ +EL
Sbjct: 960  IGQQEYAADGGSAYERESRIEIDYSKLEHHLKNLSDPDQIKKSGDSLAKEL 1010


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,876
Number of Sequences: 2352
Number of extensions: 10384
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)