Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10f05r
(755 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 135 3e-32
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 80 1e-15
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 72 5e-13
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 69 5e-12
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 66 3e-11
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 31 0.67
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 0.88
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 0.88
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 31 1.2
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 31 1.2
U40954-6|ABQ13043.1| 127|Caenorhabditis elegans Hypothetical pr... 30 2.0
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 29 3.6
U25032-1|AAB18670.1| 1379|Caenorhabditis elegans par-3 protein. 29 4.7
U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryo... 29 4.7
U00067-4|AAK73874.1| 1376|Caenorhabditis elegans Abnormal embryo... 29 4.7
U00067-3|AAK73875.1| 1379|Caenorhabditis elegans Abnormal embryo... 29 4.7
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81515-4|CAB04196.1| 739|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 28 8.2
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 135 bits (327), Expect = 3e-32
Identities = 63/111 (56%), Positives = 79/111 (71%)
Frame = -1
Query: 755 GGDPSIMAIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLNVNG 576
G DP+IM IGP PAI +LK + L + D+D+ E+NEAF Q L+ + L + M KLNVNG
Sbjct: 284 GCDPTIMGIGPAPAIREVLKKSGLKIGDIDIFEVNEAFAPQALAVQRELGIPMEKLNVNG 343
Query: 575 GATALGHPLGASGSRITAHLVHEXXXXXXXXGVGSACIGGGQGIALMIETV 423
GA ALGHPL ASG+RI+ H+VHE G+GSACIGGGQGIA++ E V
Sbjct: 344 GAIALGHPLAASGARISTHIVHELHRRNVKYGIGSACIGGGQGIAILFEKV 394
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 80.2 bits (189), Expect = 1e-15
Identities = 44/109 (40%), Positives = 62/109 (56%)
Frame = -1
Query: 755 GGDPSIMAIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLNVNG 576
G P + PV A+ LLK + L ++D+ L E+NEAF L+ K L ++ S +NV G
Sbjct: 282 GRAPIDFTVAPVDAVRLLLKKSGLQVSDIALWELNEAFAVTVLAFIKELNIEPSVVNVKG 341
Query: 575 GATALGHPLGASGSRITAHLVHEXXXXXXXXGVGSACIGGGQGIALMIE 429
GA A+GHPLG SG RI L + GV + C GGG+ A++I+
Sbjct: 342 GAVAIGHPLGMSGLRIVNSLAYS--LAPGQLGVAAICNGGGEATAVLIK 388
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 71.7 bits (168), Expect = 5e-13
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 17/120 (14%)
Frame = -1
Query: 737 MAIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLS----------CAKALK------ 606
+ + P I LL LTL DVD+ EI+EAF Q L+ C + +K
Sbjct: 325 LLLSPAYVIPKLLDKAGLTLKDVDVFEIHEAFAGQVLANLNAMDSDYFCKEQMKRSGKFG 384
Query: 605 -LDMSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXGVGSACIGGGQGIALMIE 429
+ M KLN+ GG+ ++GHP GA+G R+ H H V +AC GG G+ ++IE
Sbjct: 385 RVPMDKLNLWGGSLSIGHPFGATGVRLATHSAHRLKEEKGQYAVIAACAAGGHGVGMLIE 444
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 68.5 bits (160), Expect = 5e-12
Identities = 38/106 (35%), Positives = 57/106 (53%)
Frame = -1
Query: 746 PSIMAIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLNVNGGAT 567
P A+ P +L+ + +DV E+NEAF L+ K L +D S +N +GGA
Sbjct: 302 PLDFAVAPTLMFPKILERAGVKQSDVAQWEVNEAFSCVPLAFIKKLGVDPSLVNPHGGAV 361
Query: 566 ALGHPLGASGSRITAHLVHEXXXXXXXXGVGSACIGGGQGIALMIE 429
++GHP+G SG+R+ HLVH GV + C GGG ++I+
Sbjct: 362 SIGHPIGMSGARLITHLVH--TLKSGQIGVAAICNGGGGSSGMVIQ 405
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 66.1 bits (154), Expect = 3e-11
Identities = 37/102 (36%), Positives = 55/102 (53%)
Frame = -1
Query: 734 AIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLNVNGGATALGH 555
A+ P NLL+ + +DV E+NEAF L+ K L +D S +N +GGA ++GH
Sbjct: 359 AVAPTLLFPNLLQSAGVEQSDVAQWEVNEAFSCVPLAFIKKLGVDPSLVNPHGGAVSIGH 418
Query: 554 PLGASGSRITAHLVHEXXXXXXXXGVGSACIGGGQGIALMIE 429
P+G SG+ + HLVH GV + C G G ++I+
Sbjct: 419 PIGMSGASLITHLVH--TLESGQIGVAALCDGDGGSSGMVIQ 458
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 31.5 bits (68), Expect = 0.67
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 453 PPADAGRPHPAPQPAPS---ELVHEVRRDPGAGSAERVSQRGGAS 578
PPADA P PAP+PAP+ E V D G G A + GG S
Sbjct: 42 PPADAA-PAPAPEPAPAPAPEAVPAPAADAG-GYAAAAAPAGGGS 84
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 31.1 bits (67), Expect = 0.88
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +3
Query: 450 LPPADAGRPHPAPQPAPSELVHEVRRDPGAGSAERVSQRGGASVDVQLAHVELQRLGTRQ 629
LPP +G P P P P P L+H A + +S G S D L V+L++ R+
Sbjct: 800 LPPISSGAPPPPPPPPPGGLMH-----VAASAPVLMSNSKGISADA-LKSVQLKKAEPRE 853
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 31.1 bits (67), Expect = 0.88
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +3
Query: 450 LPPADAGRPHPAPQPAPSELVHEVRRDPGAGSAERVSQRGGASVDVQLAHVELQRLGTRQ 629
LPP +G P P P P P L+H A + +S G S D L V+L++ R+
Sbjct: 800 LPPISSGAPPPPPPPPPGGLMH-----VAASAPVLMSNSKGISADA-LKSVQLKKAEPRE 853
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 18/70 (25%)
Frame = -1
Query: 692 TKLTLNDVDLIEINEAFVAQTLSCAKALKL----------DMSK--------LNVNGGAT 567
TKLT NDV +IE+++ F L +A+ L D + +N +GG
Sbjct: 289 TKLTPNDVQVIELHDCFAPNELITYEAIGLCPVGQGHHIVDRNDNTYGGKWVINPSGGLI 348
Query: 566 ALGHPLGASG 537
+ GHP+GA+G
Sbjct: 349 SKGHPIGATG 358
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 18/70 (25%)
Frame = -1
Query: 692 TKLTLNDVDLIEINEAFVAQTLSCAKALKL----------DMSK--------LNVNGGAT 567
TKLT NDV +IE+++ F L +A+ L D + +N +GG
Sbjct: 289 TKLTPNDVQVIELHDCFAPNELITYEAIGLCPVGQGHHIVDRNDNTYGGKWVINPSGGLI 348
Query: 566 ALGHPLGASG 537
+ GHP+GA+G
Sbjct: 349 SKGHPIGATG 358
>U40954-6|ABQ13043.1| 127|Caenorhabditis elegans Hypothetical
protein ZK813.7 protein.
Length = 127
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 420 SNSLDHEGDALPPADAGRPHPAPQPAPSE 506
S+S HE L PA GRP P P SE
Sbjct: 50 SHSRSHESSELKPAGFGRPQPGPIRRSSE 78
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 453 PPADAGRPHPAPQPAPSELVHEVR 524
PP +PHP P P P +HE +
Sbjct: 297 PPRRTPQPHPKPPPPPPPPIHEAQ 320
>U25032-1|AAB18670.1| 1379|Caenorhabditis elegans par-3 protein.
Length = 1379
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -1
Query: 734 AIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLNVNGGATALG 558
A+G P I++ + + + IE E+FV + +S + A D + + GA A G
Sbjct: 1241 AVGAAPVIKSSYGSSPVRIAAASAIERGESFVVEPVSGSSASATDRRGRSTSSGAVASG 1299
>U00067-5|ABD63219.1| 1340|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform c protein.
Length = 1340
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -1
Query: 734 AIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLNVNGGATALG 558
A+G P I++ + + + IE E+FV + +S + A D + + GA A G
Sbjct: 1202 AVGAAPVIKSSYGSSPVRIAAASAIERGESFVVEPVSGSSASATDRRGRSTSSGAVASG 1260
>U00067-4|AAK73874.1| 1376|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform a protein.
Length = 1376
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -1
Query: 734 AIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLNVNGGATALG 558
A+G P I++ + + + IE E+FV + +S + A D + + GA A G
Sbjct: 1238 AVGAAPVIKSSYGSSPVRIAAASAIERGESFVVEPVSGSSASATDRRGRSTSSGAVASG 1296
>U00067-3|AAK73875.1| 1379|Caenorhabditis elegans Abnormal embryonic
partitioningof cytoplasm protein 3, isoform b protein.
Length = 1379
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = -1
Query: 734 AIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLNVNGGATALG 558
A+G P I++ + + + IE E+FV + +S + A D + + GA A G
Sbjct: 1241 AVGAAPVIKSSYGSSPVRIAAASAIERGESFVVEPVSGSSASATDRRGRSTSSGAVASG 1299
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 444 DALP-PADAGRPHPAPQPAPSELVHEVRRDPGAGSAERVSQRGGAS 578
DA P P A P PAP PAP D G G A + GG S
Sbjct: 414 DAAPAPPPAPEPVPAPAPAPEAAPVAPSADAG-GYAAAAAPAGGGS 458
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +3
Query: 438 EGDALPPADAGRPHPAPQPAPS 503
EG+A P A A P PAP PAP+
Sbjct: 472 EGEAAPAAPA-EPAPAPAPAPA 492
>Z81515-4|CAB04196.1| 739|Caenorhabditis elegans Hypothetical
protein F26H11.4 protein.
Length = 739
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 438 EGDALPPADAGRPHPAPQPAPSELVHEVRRDPGAGSAER 554
+G +PP A P P P P SE V P G A++
Sbjct: 173 KGVTIPPVAASLPCPPPPPPLSERKKNVGPKPCVGPAQK 211
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 27.9 bits (59), Expect = 8.2
Identities = 22/60 (36%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = +3
Query: 411 GGRSNSLDHEGDALPP----ADAGRPHPAPQPAPSELVHEVRRDPGAGSAERVSQRGGAS 578
GG S GDA PP ADA PAP PAP AG + GG S
Sbjct: 27 GGYSGGGGGGGDAAPPPPPPADAA---PAPAPAPEPEAAPAAPAADAGGYAAAASAGGGS 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,281,260
Number of Sequences: 27780
Number of extensions: 239766
Number of successful extensions: 1041
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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