Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10f05r
(755 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative ... 111 4e-25
At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 / 3-keto... 108 3e-24
At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 / 3-keto... 108 3e-24
At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative ... 108 3e-24
At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative ... 79 2e-15
At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative ... 79 2e-15
At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative ... 79 2e-15
At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative ... 79 2e-15
At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative ... 78 5e-15
At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative ... 78 5e-15
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 31 1.1
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 31 1.1
At2g35630.1 68415.m04369 microtubule organization 1 protein (MOR... 30 1.4
At2g03680.1 68415.m00327 expressed protein Alternative splicing ... 30 1.9
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 29 2.5
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 29 2.5
At1g08720.1 68414.m00968 mitogen-activated protein kinase kinase... 29 3.3
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 29 4.4
At3g18770.1 68416.m02382 expressed protein 28 5.8
At3g18810.1 68416.m02389 protein kinase family protein contains ... 28 7.7
>At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 443
Score = 111 bits (268), Expect = 4e-25
Identities = 57/111 (51%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Frame = -1
Query: 755 GGDPSIMAIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLNVNG 576
G DP+IM +GP AI +K L LNDVDL EINEAF +Q + C L LD K+NVNG
Sbjct: 319 GVDPAIMGVGPAVAIPAAVKAAGLELNDVDLFEINEAFASQFVYCRNKLGLDAEKINVNG 378
Query: 575 GATALGHPLGASGSRITAHLVHEXXXXXXXXGVG--SACIGGGQGIALMIE 429
GA A+GHPLGA+G+R A L+HE G S CIG G G A + E
Sbjct: 379 GAIAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGSGMGAAAVFE 429
>At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 /
3-ketoacyl-CoA thiolase 1 (PKT1) identical to
3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana]
GI:3169568
Length = 457
Score = 108 bits (260), Expect = 3e-24
Identities = 55/111 (49%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Frame = -1
Query: 755 GGDPSIMAIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLNVNG 576
G +PS+M IGP AI K+ L ++D+DL EINEAF +Q + K L+LDM K+NVNG
Sbjct: 328 GVEPSVMGIGPAVAIPAATKLAGLNVSDIDLFEINEAFASQYVYSCKKLELDMEKVNVNG 387
Query: 575 GATALGHPLGASGSRITAHLVHEXXXXXXXXGVG--SACIGGGQGIALMIE 429
GA A+GHPLGA+G+R A L+HE G S CIG G G A + E
Sbjct: 388 GAIAIGHPLGATGARCVATLLHEMKRRGKDCRFGVISMCIGTGMGAAAVFE 438
>At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 /
3-ketoacyl-CoA thiolase 1 (PKT1) identical to
3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana]
GI:3169568
Length = 414
Score = 108 bits (260), Expect = 3e-24
Identities = 55/111 (49%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Frame = -1
Query: 755 GGDPSIMAIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLNVNG 576
G +PS+M IGP AI K+ L ++D+DL EINEAF +Q + K L+LDM K+NVNG
Sbjct: 285 GVEPSVMGIGPAVAIPAATKLAGLNVSDIDLFEINEAFASQYVYSCKKLELDMEKVNVNG 344
Query: 575 GATALGHPLGASGSRITAHLVHEXXXXXXXXGVG--SACIGGGQGIALMIE 429
GA A+GHPLGA+G+R A L+HE G S CIG G G A + E
Sbjct: 345 GAIAIGHPLGATGARCVATLLHEMKRRGKDCRFGVISMCIGTGMGAAAVFE 395
>At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 462
Score = 108 bits (260), Expect = 3e-24
Identities = 56/111 (50%), Positives = 68/111 (61%), Gaps = 2/111 (1%)
Frame = -1
Query: 755 GGDPSIMAIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLNVNG 576
G DP+IM IGP AI +K L L+D+DL EINEAF +Q + C L LD K+NVNG
Sbjct: 327 GVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNG 386
Query: 575 GATALGHPLGASGSRITAHLVHEXXXXXXXXGVG--SACIGGGQGIALMIE 429
GA A+GHPLGA+G+R A L+HE G S CIG G G A + E
Sbjct: 387 GAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFE 437
>At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 406
Score = 79.4 bits (187), Expect = 2e-15
Identities = 45/106 (42%), Positives = 56/106 (52%)
Frame = -1
Query: 746 PSIMAIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLNVNGGAT 567
P + P AI +K L + VD EINEAF L+ K L LD +LN +GGA
Sbjct: 299 PELFTTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAV 358
Query: 566 ALGHPLGASGSRITAHLVHEXXXXXXXXGVGSACIGGGQGIALMIE 429
+LGHPLG SG+RI L+ GV S C GGG AL++E
Sbjct: 359 SLGHPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLE 404
>At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 405
Score = 79.4 bits (187), Expect = 2e-15
Identities = 45/106 (42%), Positives = 56/106 (52%)
Frame = -1
Query: 746 PSIMAIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLNVNGGAT 567
P + P AI +K L + VD EINEAF L+ K L LD +LN +GGA
Sbjct: 298 PELFTTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAV 357
Query: 566 ALGHPLGASGSRITAHLVHEXXXXXXXXGVGSACIGGGQGIALMIE 429
+LGHPLG SG+RI L+ GV S C GGG AL++E
Sbjct: 358 SLGHPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLE 403
>At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 415
Score = 79.4 bits (187), Expect = 2e-15
Identities = 45/106 (42%), Positives = 56/106 (52%)
Frame = -1
Query: 746 PSIMAIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLNVNGGAT 567
P + P AI +K L + VD EINEAF L+ K L LD +LN +GGA
Sbjct: 298 PELFTTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAV 357
Query: 566 ALGHPLGASGSRITAHLVHEXXXXXXXXGVGSACIGGGQGIALMIE 429
+LGHPLG SG+RI L+ GV S C GGG AL++E
Sbjct: 358 SLGHPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLE 403
>At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 405
Score = 79.4 bits (187), Expect = 2e-15
Identities = 45/106 (42%), Positives = 56/106 (52%)
Frame = -1
Query: 746 PSIMAIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLNVNGGAT 567
P + P AI +K L + VD EINEAF L+ K L LD +LN +GGA
Sbjct: 298 PELFTTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAV 357
Query: 566 ALGHPLGASGSRITAHLVHEXXXXXXXXGVGSACIGGGQGIALMIE 429
+LGHPLG SG+RI L+ GV S C GGG AL++E
Sbjct: 358 SLGHPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLE 403
>At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 403
Score = 78.2 bits (184), Expect = 5e-15
Identities = 44/107 (41%), Positives = 55/107 (51%)
Frame = -1
Query: 749 DPSIMAIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLNVNGGA 570
+P P AI + L + VD EINEAF L+ K L + K+NVNGGA
Sbjct: 295 EPEFFTTAPALAIPKAIAHAGLESSQVDYYEINEAFAVVALANQKLLGIAPEKVNVNGGA 354
Query: 569 TALGHPLGASGSRITAHLVHEXXXXXXXXGVGSACIGGGQGIALMIE 429
+LGHPLG SG+RI L+ GVG C GGG AL++E
Sbjct: 355 VSLGHPLGCSGARILITLLGILKKRNGKYGVGGVCNGGGGASALVLE 401
>At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 398
Score = 78.2 bits (184), Expect = 5e-15
Identities = 44/107 (41%), Positives = 55/107 (51%)
Frame = -1
Query: 749 DPSIMAIGPVPAIENLLKVTKLTLNDVDLIEINEAFVAQTLSCAKALKLDMSKLNVNGGA 570
+P P AI + L + VD EINEAF L+ K L + K+NVNGGA
Sbjct: 290 EPEFFTTAPALAIPKAIAHAGLESSQVDYYEINEAFAVVALANQKLLGIAPEKVNVNGGA 349
Query: 569 TALGHPLGASGSRITAHLVHEXXXXXXXXGVGSACIGGGQGIALMIE 429
+LGHPLG SG+RI L+ GVG C GGG AL++E
Sbjct: 350 VSLGHPLGCSGARILITLLGILKKRNGKYGVGGVCNGGGGASALVLE 396
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 577 EAPPRWDTRSALPAPGSRRTSC-TSSDG 497
EAP RW T A A G+R SC TS DG
Sbjct: 547 EAPGRWCTTMAYSADGTRLFSCGTSKDG 574
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 577 EAPPRWDTRSALPAPGSRRTSC-TSSDG 497
EAP RW T A A G+R SC TS DG
Sbjct: 547 EAPGRWCTTMAYSADGTRLFSCGTSKDG 574
>At2g35630.1 68415.m04369 microtubule organization 1 protein (MOR1)
identical to microtubule organization 1 protein
GI:14317953 from [Arabidopsis thaliana]
Length = 1978
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -2
Query: 748 TPASWPLGLCPPSRTFLKSPNSPSMMS 668
TP+S PL PPS L SP+ PS+ S
Sbjct: 1842 TPSSLPLSTPPPSSLALPSPDIPSLSS 1868
>At2g03680.1 68415.m00327 expressed protein Alternative splicing
exists based on EST evidence
Length = 119
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 405 SRGGRSNSLDH--EGDALPPADAGRPHPAPQPAPSE 506
S GG +SLD+ GDA P +P PAP+PAP+E
Sbjct: 6 SCGGGQSSLDYLFGGDAPAP----KPVPAPRPAPTE 37
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 577 EAPPRWDTRSALPAPGSRRTSC-TSSDG 497
+AP RW T A A G+R SC TS DG
Sbjct: 547 DAPGRWCTTMAYSADGTRLFSCGTSKDG 574
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 577 EAPPRWDTRSALPAPGSRRTSC-TSSDG 497
+AP RW T A A G+R SC TS DG
Sbjct: 547 DAPGRWCTTMAYSADGTRLFSCGTSKDG 574
>At1g08720.1 68414.m00968 mitogen-activated protein kinase kinase
kinase (MAPKKK) (EDR1) identical to EDR1, a MAP kinase
kinase kinase [Arabidopsis thaliana]
gi|11127925|gb|AAG31143
Length = 933
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +3
Query: 408 RGGRSNSLDHEGDALPPADAGRPHPA---PQPAPSELVHEVRRDPGAGSAERVS 560
RGG + DA PP+D R H + PQ PS + + P AG+ ++
Sbjct: 10 RGGNQEQQNRTNDAAPPSDQNRIHVSANPPQATPSSVTETL---PVAGATSSMA 60
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 577 EAPPRWDTRSALPAPGSRRTSC-TSSDG 497
+AP +W TR A G+R SC TS DG
Sbjct: 536 DAPGKWCTRMLYSADGTRLFSCGTSKDG 563
>At3g18770.1 68416.m02382 expressed protein
Length = 625
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +3
Query: 402 TSRGGRSNSLDHEGDALPPADAGRPHP--APQPAPSELVHEVRRDP 533
T R R S DH GD P D+ +P + A LV +++ P
Sbjct: 499 TDRNSRPGSFDHRGDIHEPFDSSGSYPKKSQDAAVGALVRMLKKAP 544
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +3
Query: 420 SNSLDHEGDALPPADAGRPHPAPQPAPSELVHEVRRDPGAGSAERVSQRGGASVD 584
S+S + + + PP+D+ P P P P + + + P + S S +G + D
Sbjct: 20 SSSDNQQQSSPPPSDSSSPSPPAPPPPDDSSNGSPQPPSSDSQSPPSPQGNNNND 74
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,300,544
Number of Sequences: 28952
Number of extensions: 217730
Number of successful extensions: 775
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1682736544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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