Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10f04f
         (637 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E0F7CE Cluster: hypothetical protein OM2255_1873...    33   5.8  
UniRef50_Q8IL76 Cluster: Putative uncharacterized protein; n=4; ...    33   7.6  
UniRef50_Q8I5D0 Cluster: Putative uncharacterized protein; n=2; ...    33   7.6  

>UniRef50_UPI0000E0F7CE Cluster: hypothetical protein OM2255_18732;
           n=1; alpha proteobacterium HTCC2255|Rep: hypothetical
           protein OM2255_18732 - alpha proteobacterium HTCC2255
          Length = 269

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 72  DHRCIARYEYTWSSDTVPPRSAIDCALFIFIY*VTMKHV 188
           D +   +Y+ +W SDT   R+A+ CA+F FI     KHV
Sbjct: 231 DKQSAIKYDSSWLSDT---RNAVPCAIFPFIIAYNKKHV 266


>UniRef50_Q8IL76 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 1811

 Score = 32.7 bits (71), Expect = 7.6
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +1

Query: 463 MYYNFYSIVYKALLEKYFIEQYLFILYKNEMK--VL*NRVQITTSIKYCHKK 612
           +YYN   ++Y    +    E Y F + KN+M+     NR  ITT  KY +KK
Sbjct: 494 VYYNILIVLYYLFNQHIKKELYHFNMLKNKMQSSFFMNRFYITTRYKYLNKK 545


>UniRef50_Q8I5D0 Cluster: Putative uncharacterized protein; n=2;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 3209

 Score = 32.7 bits (71), Expect = 7.6
 Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = -3

Query: 617  YLFLW-QYLIEVVICTRFYNTFISFLYKINKYCSIKYFSN 501
            YL+++ ++L+E +  +R + TF+ F++    +C  KYFSN
Sbjct: 3087 YLYIYFKFLVEYLDISRIHQTFLYFIHTTLNHCQ-KYFSN 3125


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,170,294
Number of Sequences: 1657284
Number of extensions: 10970198
Number of successful extensions: 22336
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22324
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)