Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10f04f
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   2.8  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   2.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.7  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   8.6  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.6  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
 Frame = +1

Query: 364 IFLQNVTIRIWLNHTF*YCIHILRY*SKILKFV-MYYNFYSIVYKALLEKYFIEQYLFIL 540
           IFL  V+  I++  T     +  R   KIL  + +YY ++ ++  +   + F+E Y  ++
Sbjct: 188 IFLMFVSYNIYVCQTVSNFEYFQR---KILLMIQLYYLYFDVIVISTFLQLFLEHY-EVI 243

Query: 541 YKNEMKVL*NRVQITTSIKYCHKKR*SI 624
            +  +     +   T   K C+K + +I
Sbjct: 244 NRQTLDTADVKTLTTVVEKECYKMKVTI 271


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
 Frame = +1

Query: 364 IFLQNVTIRIWLNHTF*YCIHILRY*SKILKFV-MYYNFYSIVYKALLEKYFIEQYLFIL 540
           IFL  V+  I++  T     +  R   KIL  + +YY ++ ++  +   + F+E Y  ++
Sbjct: 114 IFLMFVSYNIYVCQTVSNFEYFQR---KILLMIQLYYLYFDVIVISTFLQLFLEHY-EVI 169

Query: 541 YKNEMKVL*NRVQITTSIKYCHKKR*SI 624
            +  +     +   T   K C+K + +I
Sbjct: 170 NRQTLDTADVKTLTTVVEKECYKMKVTI 197


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 415 YCIHILRY*SKILKFVMYYNFYSIV 489
           + IH+L Y   I+   +YY +Y+ +
Sbjct: 222 FTIHLLFYCVLIILLCIYYFYYAFI 246


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 558 SIVKSCTDYDFN 593
           SIVK+C  Y FN
Sbjct: 278 SIVKNCLSYCFN 289


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 558 SIVKSCTDYDFN 593
           SIVK+C  Y FN
Sbjct: 278 SIVKNCLSYCFN 289


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,484
Number of Sequences: 336
Number of extensions: 3309
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)