Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10f04f
         (637 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    25   0.81 
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    24   1.1  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    24   1.1  
AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49 ...    22   5.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   7.6  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   7.6  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 463 MYYNFYSIVYKALLEKYFIEQYLFILYKNEMKVL*NRVQ 579
           ++YN   I+Y +L   Y     +  LY N  K L NR +
Sbjct: 337 LFYNTDFIIYSSLSSFYIPCIIMVFLYYNIFKALRNRAR 375


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 614 LFLWQYLIEVVICTRFYNTFIS 549
           +F+W Y+I ++    FY+  +S
Sbjct: 224 IFIWAYVIPLIFIILFYSRLLS 245


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 614 LFLWQYLIEVVICTRFYNTFIS 549
           +F+W Y+I ++    FY+  +S
Sbjct: 224 IFIWAYVIPLIFIILFYSRLLS 245


>AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49
          protein.
          Length = 134

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 45 KNWYPPAGFDHRCIARYE 98
          +NW  P G D+R   R++
Sbjct: 32 RNWRKPKGIDNRVRRRFK 49


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +1

Query: 475 FYSIVYKALLEKYFIEQ 525
           FY  ++K +L +Y++E+
Sbjct: 257 FYFFLHKQVLNRYYLER 273


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +1

Query: 475 FYSIVYKALLEKYFIEQ 525
           FY  ++K +L +Y++E+
Sbjct: 257 FYFFLHKQVLNRYYLER 273


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,881
Number of Sequences: 438
Number of extensions: 3660
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)