Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10f02r
         (622 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.8  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 263 AMSRHSERK*ERKHHI*FFSNKGDS 189
           A   H ER+    HH   +S  GDS
Sbjct: 364 AFDFHREREPVADHHANLYSRPGDS 388


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 351 RWCAMVLFTVIFWQGCRCVSNIF 419
           RW       VI   GC C+ +IF
Sbjct: 39  RWYICYTIGVIITIGCLCIWSIF 61


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 108 SFCVSRWVLIFCNNSFFTES 167
           SFC     L++C+ +FF  S
Sbjct: 42  SFCTFVAALVYCSVTFFALS 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,271
Number of Sequences: 336
Number of extensions: 2254
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)