Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10f02r
         (622 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1826 - 40164306-40164355,40165019-40165095,40165796-401658...    48   8e-06
02_05_0975 + 33227431-33227730,33228556-33228636,33228883-332296...    29   3.9  
01_01_0066 - 513578-513730,513809-513920,514000-514163,514369-51...    28   5.2  

>01_06_1826 -
           40164306-40164355,40165019-40165095,40165796-40165890,
           40166028-40166099,40166200-40166287,40166481-40166557
          Length = 152

 Score = 47.6 bits (108), Expect = 8e-06
 Identities = 20/59 (33%), Positives = 32/59 (54%)
 Frame = -1

Query: 355 QRLILSGDXXXXXXXXXXXXXECGWRDQVRMLCRDIVKENESGNITFDSLVTKVTPRAR 179
           +RL+ SG+             ECGWRD+++ LCR   ++    N+T D L+  +TP+ R
Sbjct: 78  KRLVESGEKEKLMELLRERLVECGWRDEMKALCRAYARKKGRNNVTVDDLIHVITPKGR 136


>02_05_0975 +
           33227431-33227730,33228556-33228636,33228883-33229680,
           33230829-33231005,33231159-33231274,33231422-33231520,
           33231598-33232040,33232147-33232184,33232343-33232600,
           33233378-33233525,33233989-33234108,33234884-33234984,
           33235090-33235213,33235386-33235498,33236103-33236214,
           33236298-33236432,33236527-33236593,33236685-33236741,
           33236774-33236900,33237221-33237338,33237418-33237929
          Length = 1347

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -3

Query: 161 SEKRIIAEN*NPSTHTERPIKIKSLXNLC--CAIXNXIFRLKSG 36
           SE+   A N N + HT  PI+ K + ++C  C     I   KSG
Sbjct: 671 SERIANAANRNRNQHTSHPIETKEVDSVCTPCPAEESICSFKSG 714


>01_01_0066 - 513578-513730,513809-513920,514000-514163,514369-514521,
            514598-514736,514823-514923,514995-515666,515953-516038,
            516112-516777,516874-517128,517231-517358,518645-518799,
            518880-519133,519186-519260,519324-519399,519511-519644,
            519871-520153,520692-520850,520940-521038,521142-521310,
            521423-521653,522002-522114,524179-524310,524389-524469,
            525641-525763
          Length = 1570

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -1

Query: 259  CRDIVKENESGNITFDSLVTKVTPRARALVPDSVKKELLQ 140
            CR I+        T D L+ KV  + +A+  D +  +LLQ
Sbjct: 1353 CRSIIGTQSYVLFTLDKLIYKVVKQLQAIATDEMDNKLLQ 1392


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,273,424
Number of Sequences: 37544
Number of extensions: 196983
Number of successful extensions: 359
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)