Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10e24f
(593 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81046-2|CAB02824.1| 295|Caenorhabditis elegans Hypothetical pr... 82 3e-16
Z81046-5|CAB02823.1| 225|Caenorhabditis elegans Hypothetical pr... 79 2e-15
AC199167-2|ABO33246.1| 222|Caenorhabditis elegans Hypothetical ... 52 2e-07
AC199167-1|ABO33247.1| 233|Caenorhabditis elegans Hypothetical ... 31 0.82
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 30 1.1
L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembl... 29 2.5
AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein... 29 2.5
Z83104-7|CAH60780.1| 762|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z70685-2|CAA94606.2| 762|Caenorhabditis elegans Hypothetical pr... 28 4.4
AL132876-3|CAD21657.2| 746|Caenorhabditis elegans Hypothetical ... 28 4.4
AF016428-1|AAO26001.1| 330|Caenorhabditis elegans Serpentine re... 28 4.4
Z78012-6|CAB01416.1| 480|Caenorhabditis elegans Hypothetical pr... 28 5.8
AY557405-1|AAS64750.1| 480|Caenorhabditis elegans cyclin L prot... 28 5.8
Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z81119-5|CAB03333.1| 386|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z68316-6|CAA92682.2| 357|Caenorhabditis elegans Hypothetical pr... 27 7.6
U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-li... 27 7.6
AL032618-2|CAA21485.1| 640|Caenorhabditis elegans Hypothetical ... 27 7.6
AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical... 27 7.6
AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical... 27 7.6
>Z81046-2|CAB02824.1| 295|Caenorhabditis elegans Hypothetical
protein C37E2.3 protein.
Length = 295
Score = 82.2 bits (194), Expect = 3e-16
Identities = 38/126 (30%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Frame = +1
Query: 211 VLNDIIGTNATAPKNPPLIRRVKDIV-FSSAFTLALYVFATFWGLYLIDEDLILPAHIQE 387
VLN + T I+ V D + F++ F +A+ + FWG Y+ D DL++PA + E
Sbjct: 127 VLNVVYSTLVVIGYKSKTIKEVVDFMHFTAMFPVAVILCGMFWGFYVYDSDLVMPAWVAE 186
Query: 388 VLPNWINHGMHTTIVPFIILELLLTNRNYPTRKVGLSVTLL-INFTYVFWIHYLYFTQGT 564
++P+W+NH HT ++ FI+L+ R+ P+ ++++ + F ++ + Y+ +
Sbjct: 187 IVPSWLNHINHTYLIVFILLDSYYHKRDAPSNSTSWMISVVYVTFYFIIVLGVKYYNR-M 245
Query: 565 WVYPFL 582
WVYP L
Sbjct: 246 WVYPVL 251
>Z81046-5|CAB02823.1| 225|Caenorhabditis elegans Hypothetical
protein C37E2.2a protein.
Length = 225
Score = 79.0 bits (186), Expect = 2e-15
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Frame = +1
Query: 265 IRRVKDIV-FSSAFTLALYVFATFWGLYLIDEDLILPAHIQEVLPNWINHGMHTTIVPFI 441
++++ D + F+S F + + FWGLY I+ L++P I +++P+W+NH HT + FI
Sbjct: 66 LQKISDFMHFTSIFPVGMITCGLFWGLYAINPALVMPDWIAKLIPSWLNHITHTYPIIFI 125
Query: 442 ILELLLTNRNYPTRKVGLSVTLLINFTYVFWIHYLYFTQGTWVYPFLDL 588
IL+ R P L + + F Y I Y+ F G W+YP L L
Sbjct: 126 ILDSYFHKRTPPKTIASLIFSAALVFVYFMIICYVRFFDGYWLYPILSL 174
>AC199167-2|ABO33246.1| 222|Caenorhabditis elegans Hypothetical
protein cTel55X.1a protein.
Length = 222
Score = 52.4 bits (120), Expect = 2e-07
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Frame = +1
Query: 307 LALYVFATFWGLYLIDEDLILPAHI-QEVLPN-WINHGMHTTIVPFIILELLLTNR-NYP 477
+ + V FWGL+L D + + ++L W NHG+HT L+L + N ++
Sbjct: 84 IGVAVTVLFWGLFLFDPATLARDEMAMKILTLFWFNHGLHTLPAITAHLDLAIYNHTSFS 143
Query: 478 TRKVGLSVTLLINFTYVFWIHYLYFTQGTWVYPFL 582
T + + + + Y+ +HY+++T G W YP L
Sbjct: 144 TSAILKGIAVFVTL-YLIDLHYVFYTSGFWAYPIL 177
>AC199167-1|ABO33247.1| 233|Caenorhabditis elegans Hypothetical
protein cTel55X.1b protein.
Length = 233
Score = 30.7 bits (66), Expect = 0.82
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 307 LALYVFATFWGLYLIDEDLILPAHI-QEVLPN-WINHGMHTTIVPFIILELLLTN 465
+ + V FWGL+L D + + ++L W NHG+HT L+L + N
Sbjct: 84 IGVAVTVLFWGLFLFDPATLARDEMAMKILTLFWFNHGLHTLPAITAHLDLAIYN 138
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/84 (25%), Positives = 34/84 (40%)
Frame = +3
Query: 219 RHHRHQRYSAKKPAPHQKS*RHRLQFGVHSSLICVCHILGPVLDRRGPNSAGPHPRGSTK 398
+HH Q S + P+Q+ +H +G+ S +D+ P S P ST
Sbjct: 541 QHHPQQHPSQHQTQPNQQQQQHPSGYGIGVSTAPASMEPSQSVDQSAPPSQAQIPATSTP 600
Query: 399 LDKSRDAHNYCTFHHFGASLDKQK 470
S+ + Y F F +S Q+
Sbjct: 601 STSSQQQNAYPEFPDFPSSSGYQE 624
>L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembly
abnormal protein 4 protein.
Length = 808
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 363 NSAGPHPRGSTKLDKSRDAHNYCT-FHHFGASLDKQKLSNEKSR 491
NS+ +P+ D++R H Y H G+SLD+QKL E R
Sbjct: 282 NSSRQNPQNGNVQDENRPEHVYDQPIHVPGSSLDRQKLEIEIRR 325
>AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein
protein.
Length = 808
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 363 NSAGPHPRGSTKLDKSRDAHNYCT-FHHFGASLDKQKLSNEKSR 491
NS+ +P+ D++R H Y H G+SLD+QKL E R
Sbjct: 282 NSSRQNPQNGNVQDENRPEHVYDQPIHVPGSSLDRQKLEIEIRR 325
>Z83104-7|CAH60780.1| 762|Caenorhabditis elegans Hypothetical
protein R07D5.2 protein.
Length = 762
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/53 (24%), Positives = 28/53 (52%)
Frame = +1
Query: 379 IQEVLPNWINHGMHTTIVPFIILELLLTNRNYPTRKVGLSVTLLINFTYVFWI 537
+QE L + +G T ++ ++L L++ NR+ + + LS +++ WI
Sbjct: 445 VQETLYSLAQNGSLTGLIHLLVLVLVVINRSMSGKSIHLSKISVVSVFACVWI 497
>Z70685-2|CAA94606.2| 762|Caenorhabditis elegans Hypothetical
protein R07D5.2 protein.
Length = 762
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/53 (24%), Positives = 28/53 (52%)
Frame = +1
Query: 379 IQEVLPNWINHGMHTTIVPFIILELLLTNRNYPTRKVGLSVTLLINFTYVFWI 537
+QE L + +G T ++ ++L L++ NR+ + + LS +++ WI
Sbjct: 445 VQETLYSLAQNGSLTGLIHLLVLVLVVINRSMSGKSIHLSKISVVSVFACVWI 497
>AL132876-3|CAD21657.2| 746|Caenorhabditis elegans Hypothetical
protein Y105E8A.3 protein.
Length = 746
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +1
Query: 412 GMHTTIVPFIILELLLTNRNYPTRK----VGLSVTLLINFTY 525
G+ T+V FI+ + LT+ N P + VG+S T L FTY
Sbjct: 331 GVSITVVCFILASISLTHSNQPKHRGGHFVGISNTGLPLFTY 372
>AF016428-1|AAO26001.1| 330|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 66 protein.
Length = 330
Score = 28.3 bits (60), Expect = 4.4
Identities = 26/130 (20%), Positives = 59/130 (45%), Gaps = 10/130 (7%)
Frame = +1
Query: 154 GIFLTFWCFALQTIYFGTAVLNDIIGTNATAPKNPPLIRRVKDIVFSSAFTLALYVFATF 333
G+ + F TI+FG I+ +NP L++ + ++ FT+ ++
Sbjct: 145 GLAFALYSFLPTTIWFGFTNEVHILNDTLMRTRNPELVKTATNT--TAIFTIIYFIIICV 202
Query: 334 WGL---YLIDEDLILPAHIQEVLPNWINH--GMHTTIVPFIILELLLTNRN-----YPTR 483
G+ +I+++ + + E + + H +H + I+L +LT+ N +P
Sbjct: 203 LGIKTSVIINKNKQALSAMYEKIAKKLTHIAIVHCVVFAGILLWSVLTSLNSFWNFFPDF 262
Query: 484 KVGLSVTLLI 513
+G++ TL++
Sbjct: 263 IIGINQTLMV 272
>Z78012-6|CAB01416.1| 480|Caenorhabditis elegans Hypothetical
protein C52E4.6a protein.
Length = 480
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 462 KQKLSNEKSRIICDTAY*FYVRILDSLLVFHSRNLGVSISRP 587
KQ + N + RI+ + +V+ L+V + LG++ SRP
Sbjct: 213 KQHMINSERRILATLGFVVHVKHPHRLIVAYGHTLGITQSRP 254
>AY557405-1|AAS64750.1| 480|Caenorhabditis elegans cyclin L
protein.
Length = 480
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 462 KQKLSNEKSRIICDTAY*FYVRILDSLLVFHSRNLGVSISRP 587
KQ + N + RI+ + +V+ L+V + LG++ SRP
Sbjct: 213 KQHMINSERRILATLGFVVHVKHPHRLIVAYGHTLGITQSRP 254
>Z82269-5|CAH60772.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 27.5 bits (58), Expect = 7.6
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -3
Query: 264 EGRVFWRCSVGADDVVQHCCTE 199
+G+ W+C + V+Q+CC +
Sbjct: 28 KGKQEWKCEKNSQPVIQYCCVD 49
>Z82269-4|CAB70200.2| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 27.5 bits (58), Expect = 7.6
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -3
Query: 264 EGRVFWRCSVGADDVVQHCCTE 199
+G+ W+C + V+Q+CC +
Sbjct: 28 KGKQEWKCEKNSQPVIQYCCVD 49
>Z81119-5|CAB03333.1| 386|Caenorhabditis elegans Hypothetical
protein T10H4.6 protein.
Length = 386
Score = 27.5 bits (58), Expect = 7.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 52 LSVVLFNSYVIWYDQQYVEIPL 117
+SVV+F +++WY QY + L
Sbjct: 166 MSVVVFTFWILWYSSQYFTMTL 187
>Z68316-6|CAA92682.2| 357|Caenorhabditis elegans Hypothetical
protein K08E4.5 protein.
Length = 357
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/50 (22%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 427 IVPFIILELLLTNRNYPTRKVGLSVTL-LINFTYVFWIHYLYFTQGTWVY 573
+VP + + T+++ +++ +N+ Y+FWI ++F+ W Y
Sbjct: 216 LVPIALCTVCALKLKMITKEISTVISINSVNY-YLFWISIIHFSTSFWYY 264
>U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-like
protein protein16 protein.
Length = 326
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 210 SVERHHRHQRYSAKKPAPHQKS*RH 284
SV+ HH HQ+ +A+ HQK H
Sbjct: 161 SVDEHHGHQKKNAEDHHEHQKRSEH 185
>AL032618-2|CAA21485.1| 640|Caenorhabditis elegans Hypothetical
protein Y42A5A.2 protein.
Length = 640
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 334 WGLYLIDEDLILPAHIQEVLPNWINHGMHTTIVPFIILELLLTNR 468
WG I DL H E L + I H M + +P I + +L N+
Sbjct: 297 WGNRTIPRDLSKMDHNWEALNSVIEHRMRSYDIPSISIHILRDNK 341
>AL021487-15|CAH60766.1| 618|Caenorhabditis elegans Hypothetical
protein Y45F10B.13b protein.
Length = 618
Score = 27.5 bits (58), Expect = 7.6
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -3
Query: 264 EGRVFWRCSVGADDVVQHCCTE 199
+G+ W+C + V+Q+CC +
Sbjct: 28 KGKQEWKCEKNSQPVIQYCCVD 49
>AL021487-14|CAA16360.3| 633|Caenorhabditis elegans Hypothetical
protein Y45F10B.13a protein.
Length = 633
Score = 27.5 bits (58), Expect = 7.6
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -3
Query: 264 EGRVFWRCSVGADDVVQHCCTE 199
+G+ W+C + V+Q+CC +
Sbjct: 28 KGKQEWKCEKNSQPVIQYCCVD 49
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,845,648
Number of Sequences: 27780
Number of extensions: 333363
Number of successful extensions: 1063
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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