Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10e23f
         (586 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   4.2  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    23   5.5  
AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    23   7.3  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   9.6  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 112 SADSSTTPALAASTHIANTTRS 47
           +AD S++PA ++ TH   T RS
Sbjct: 236 TADPSSSPAYSSITHYEPTARS 257


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 321 DIVKKYFPLSFRLIMAGNYVKLIYRNYNLALKLGSTTNPSNER 449
           ++V+ Y P    LI  GN V  +  +  + L+ GS    SNE+
Sbjct: 112 NLVEVYEPPPVVLIDTGNNVVEVNTDDQIVLEDGSVEGESNEQ 154


>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 243 VVNNLIIDKRRNTMEYCYKLWVG-NGQDIVKKYFPL 347
           ++N  I+ + RN+ME+C     G  G  +V++  P+
Sbjct: 85  LLNRKILQRLRNSMEHCMAGSGGLGGGAVVREALPI 120


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -1

Query: 139 RSWLEGLMLSADSSTTPALAASTHIANTTRSFILLG 32
           R W+E + L  + S T  +  S+H +      I+ G
Sbjct: 670 RQWMESVELQLNISKTEYILVSSHRSRQESQIIVEG 705


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,563
Number of Sequences: 2352
Number of extensions: 11397
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)