Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10e17r
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    25   0.85 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    24   1.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.4  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   6.0  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   6.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   6.0  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   6.0  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 1   IYYSYKHGTPITNIQFRDT 57
           I ++YK+G PI  IQ+ +T
Sbjct: 239 IAFAYKYGDPIPYIQYTET 257


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = +2

Query: 305 LKLCHYSN*MTRTVLVKPEPCFQPVTTTALSPGCTKPRCRPNR---SPLCTR 451
           LK  H +   +   +V+P P  QPV      P  TK    P+R   + LCT+
Sbjct: 375 LKAIHQTLGGSSNEIVEPVP--QPVEEVTQKPSSTKAPAPPSRDLTTTLCTK 424


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 160  IFFLNEFNIIYGLITMS*WISVL 92
            +FF    + IYGLI M+ ++ V+
Sbjct: 943  LFFAGLISAIYGLIMMAVFVGVM 965


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 160  IFFLNEFNIIYGLITMS*WISVL 92
            +FF    + IYGLI M+ ++ V+
Sbjct: 943  LFFAGLISAIYGLIMMAVFVGVM 965


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 303 EDENRHLS*VLVQVITYLQLSFVFFL 226
           +D NR+     VQV+T   +SF FF+
Sbjct: 221 DDLNRYFE---VQVLTIFGVSFYFFI 243


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 4/27 (14%)
 Frame = -2

Query: 128 WSHHNVVMDISSICETN----YYMYKR 60
           + HH +V+D+   C T     +Y+ KR
Sbjct: 186 YQHHKIVLDMGKNCVTYVFDLFYLSKR 212


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 303 EDENRHLS*VLVQVITYLQLSFVFFL 226
           +D NR+     VQV+T   +SF FF+
Sbjct: 217 DDLNRYFE---VQVLTIFGVSFYFFI 239


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +2

Query: 395 SPGCTKPRCRPNRSPLC--TRLSTSFSQSDAVGS 490
           SP    PRC P   P C  + +S S S++  V S
Sbjct: 25  SPEPYPPRCPPIYEPSCQYSPVSNSDSENSEVSS 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,762
Number of Sequences: 336
Number of extensions: 3036
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)